| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0343 |
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| Symbol | |
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| ID | 7973487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 369906 |
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| End bp | 371399 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790946 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942272 |
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| Protein GI | 239813362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGGC TGGAAGGCGT GTCCAAGCGC TTTCCGGGCG TGAAGGCGCT CTCGGGCATC
GACCTCTCGA TCCGCAAGGG CGAGGTGCAT GCGCTGCTCG GCGAGAACGG CGCGGGCAAG
TCGACGCTGA TGAAGATCCT CGGCGGCATC TACCAGGCCG ACGAGGGGCG CATCTTCATC
GAGGGCAGCG AGCGCAGCTT CGCGGGCTAT GCCGACGCGA TCGCGGCGGG CATCGGCATC
ATCTTCCAGG AGTTCAGCCT GGTGCCCTAC CTGAACGCGG TGGAGAACAT CTTTCTGGGC
CGCTACCTGA CGAACCGCTT CGGGCTGATG GACAGGGCCG CGATGAAGCG TTCGGCGCAG
CAGCTGTTCG ACGAGCTGGG CGTGCAGATC GACCTTGGCG TGCCGATCTG CCGGCTCTCG
GTGGCGCAGC AGCAGTTCGT GGAGATCGGC AAGGCGCTGT CGCTCGACGC GAAGCTGCTG
GTGCTCGACG AGCCCACCGC CACGCTCACG CCCAACGAGG CCGGCCACCT GTTCAGGATC
ATGCGCGAGC TGCGTGCCAG GGGCGTGGCG ATGATCTTCA TCTCGCACCA CCTGGACGAG
ATCTTCGAGG TGTGCGACCG CATCAGCGTG CTGCGCGATG GCGCCAATGC AGGGCATGCA
GAGGTGGGCG CGACCGATGT GGATGCGCTG GTCGAGATGA TGGTCGGCCG CAGGATCGAG
CACAGCTTCC CGCCCAAGCC GCAGCCCGCG CCGCGCGGGC GCAAGGTGCT CGAGGTGCCC
GAGATCCAGC TCGCCAAGGG CGGGCCCGTG AACAGCTTCG AGCTGCATGA AGGCGAGATC
CTCGGCTTTG CAGGGCTGGT GGGCTCGGGC CGCACCGAGC TTGCGCTGGG CATGATGGGC
GCCGACCGCG CGCACCGCAA GACGGTGCTG CGCAACGGCC GGCCCGTTCG CTTGAACGAT
CCGACGCAGG CGCTCGCGAA CGGCATTGGC CTGTTGCCCG AGAGCCGCAA GGTCGAGGGG
CTGATCACCG ACTTCACGGT CCGCTTCAAC ATCTCGATGA ACAACCTCGG CCGCCACAGG
CGCGCGGGGC TCGTGAGCCA GAAGTCGGAA AGGCAATCGG CCGCCGAGCT CTCGAAGCGC
GTGGGCGTGA AGGCGCCGGG CATCGAGACG CGCGTGGCCA CGCTGTCGGG CGGCAACCAG
CAGAAGGTGG TGATCGCGCG CTGGCTCGGC CACGCGAGCG AGGTGCTGAT CTTCGACGAG
CCCACGCGCG GCATCGACGT GGGCGCCAAG GCCGAGATCT ACGGCCTGAT GCGCGAACTC
ACGCAGCAGG GCAAGGCCAT CATCATGATC TCGAGCGAGC TGCCCGAGAT CGTGGGCATG
TGCGACCGCG TGGCGGTGTT CTCGGGCGGG TCCATCGTGG CCACGCTCGA AGGCGACGCC
ATCAATTCGG GGGACATCAT GCGGCACGCC ACTTCGTCCG GGAGCCTTCA ATGA
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| Protein sequence | MLRLEGVSKR FPGVKALSGI DLSIRKGEVH ALLGENGAGK STLMKILGGI YQADEGRIFI
EGSERSFAGY ADAIAAGIGI IFQEFSLVPY LNAVENIFLG RYLTNRFGLM DRAAMKRSAQ
QLFDELGVQI DLGVPICRLS VAQQQFVEIG KALSLDAKLL VLDEPTATLT PNEAGHLFRI
MRELRARGVA MIFISHHLDE IFEVCDRISV LRDGANAGHA EVGATDVDAL VEMMVGRRIE
HSFPPKPQPA PRGRKVLEVP EIQLAKGGPV NSFELHEGEI LGFAGLVGSG RTELALGMMG
ADRAHRKTVL RNGRPVRLND PTQALANGIG LLPESRKVEG LITDFTVRFN ISMNNLGRHR
RAGLVSQKSE RQSAAELSKR VGVKAPGIET RVATLSGGNQ QKVVIARWLG HASEVLIFDE
PTRGIDVGAK AEIYGLMREL TQQGKAIIMI SSELPEIVGM CDRVAVFSGG SIVATLEGDA
INSGDIMRHA TSSGSLQ
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