| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0341 |
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| Symbol | |
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| ID | 7973485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 367312 |
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| End bp | 368451 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790944 |
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| Product | Alcohol dehydrogenase GroES domain protein |
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| Protein accession | YP_002942270 |
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| Protein GI | 239813360 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.384488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATC AAAAGCTCCA GCCCGGCGCA TCGGGCGCCA TCGGCCAACT CGCCGCCATG
CAGGCCGTCG TCTGCCACGG CCCCAAGGAC TACCGGCTCG AAACCGTCGC GATGCCCGGC
ATCGGCCCGA ACGAGCTGCT GATCTCCATT GCGGCCTGCG GCATCTGCGC TTCCGACTGC
AAGTGCCACT CGGGCGCGAA GATGTTCTGG GGCGGCGACG GCCAGCCTTC GTGGGTCAAG
GCGCCGGTGA TTCCCGGCCA TGAATTCTTC GGTTATGTCG AAGCGCTCGG CGAAGGCGCG
GCCGAGCACT TCGGCGTGGA AAAAGGCGAC CGCGTGATCG CCGAGCAGAT CGTGCCCTGC
GGCAAGTGCC GCTTCTGCAC CTCGGGCAAG TACTGGATGT GCGAGGTGCA CAACATCTTC
GGCTTCCAGC GCATCGTGGC CGACGGCGGC ATGGCCGACT ACATGCGGCT GCCGCCGACC
TCGCGCGTGC ACAGGATCCC GGACGGCATC TCGCTGGAAG ACGCCGCCAT CATCGAGCCG
CTCTCGTGCG CGATCCACAC GGTGAACCGG GGCGACATCC AGTTGGACGA CGTGGTGGTG
ATCGCCGGCG CCGGCCCGCT CGGGCTGATG ATGGTGCAGG CCGCGCACCT GAAGACGCCG
AAGAAGCTGA TCGTGATCGA CCTCGTGCCC GAGCGCCTCG CACTGGCCAA GAAGTTTGGC
GCCGACGTGA CGATCGATGC CAGGACCGAG AACGCCGACG CCATCGTCAA GGGCCTGACC
GAGGGCTACG GCTGCGACGT GTACATCGAG ACCACGGGCG CGCCCATCGG CGTGACGCAG
GGGCTGGAGA TGATCCGCAA GCTCGGCCGC TTCGTCGAGT TCAGCGTGTT CGGCTCGGAG
ACCAGCGCCG ACTGGTCGAT CATCGGGGAC CGCAAGGAAC TCGACGTGCG CGGCGCGCAC
CTGGGGCCCT ACTGCTACCC GATTGCCATC GACCTGCTGG CGCGCGGGCT CGTCACCTCG
AAGGGCATCG TGACGCACGA CTTCCCGTTG ACCGAGTGGG AGCGCGCCTT CACACTGGCC
AACTCGCTCG ATTCCATCAA GGTGCTGCTC AAGCCGCAGC CGCGGGCAAC AACATCATGA
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| Protein sequence | MSYQKLQPGA SGAIGQLAAM QAVVCHGPKD YRLETVAMPG IGPNELLISI AACGICASDC
KCHSGAKMFW GGDGQPSWVK APVIPGHEFF GYVEALGEGA AEHFGVEKGD RVIAEQIVPC
GKCRFCTSGK YWMCEVHNIF GFQRIVADGG MADYMRLPPT SRVHRIPDGI SLEDAAIIEP
LSCAIHTVNR GDIQLDDVVV IAGAGPLGLM MVQAAHLKTP KKLIVIDLVP ERLALAKKFG
ADVTIDARTE NADAIVKGLT EGYGCDVYIE TTGAPIGVTQ GLEMIRKLGR FVEFSVFGSE
TSADWSIIGD RKELDVRGAH LGPYCYPIAI DLLARGLVTS KGIVTHDFPL TEWERAFTLA
NSLDSIKVLL KPQPRATTS
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