| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0333 |
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| Symbol | |
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| ID | 7973477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 357696 |
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| End bp | 358901 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790936 |
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| Product | amidohydrolase |
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| Protein accession | YP_002942262 |
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| Protein GI | 239813352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA TCGACTCGCT CGTCACGCAG GCGGCCGGCA TCGCCGCCGT GCGGCGTGAC
CTCCACGCCC ATCCCGAACT CTGCTTCGAA GAAGTCCGCA CCGCCGACGT GGTGGCAGGC
AAGCTCACCG AATGGGGCAT TCCCATCCAC CGGGGCCTGG GCACCACCGG CGTGGTTGGC
ATCGTCAAGA ACGGCACCAG CACTCGCGCC GTGGGCCTGC GCGCCGACAT GGACGCGCTG
CCCGTCACCG AGCTCAACAC CTTCGCGCAT GCCAGCAAGC ACCACGGCAA GATGCACGCC
TGCGGGCACG ACGGCCACAC GGCCATGCTG CTCGCGGCCG CGCAGCATCT TGCGAAGAAC
CGCAATTTCG ACGGCACCGT CTACCTGATC TTCCAGCCGG CCGAAGAGGG CGGCGGCGGC
GCGCGCGAGA TGATCAAGGA GGGGCTGTTC GAACAGTTCC CGATGGACGC CGTCTTCGGC
ATGCACAACT GGCCCGGCAT GAAGGCCGGC CAGTTCGCGG TGAGCCCGGG GCCGGTGATG
GCGTCGGGCA ACAAGTTCTA CGTTAACGTG ATCGGCAAGG GCGGCCATGC CGCGCTGCCG
CAGACCGGCA TCGACCCGGT GCCGATCGCC TGCGAGATCG TGCAGGCCTT CCAGACCATC
CTCACGCGCA AGATGAAGCC GACCGACTCG GCCGTGATCT CGGTCACCAC CATCCATGCC
GGCGAAACCA ACAACGTGAT CCCCGACAAC TGCGAGCTGA CGGGCACGGT GCGCACCTTC
TCGATCGAGG TGCTCGACAT GATCGAGTCG CGCATGCGCC AGATCGCCGA GCACATCTGC
GCCGCGCACG ACGCGACGTG CGACTTCCGC TTCGAGCGCT ACTACCCGCC CACCATCAAC
ACCGAGGCCG AGGCCAACTT CGCGCGCCGC GTGATGGGCG GGATCGTCGG CCCCGAGAAC
GTGCTGCGGC AGGAAGCCGC CATGACCTCC GAAGACTTCG CCTTCATGCT GCAGGCCAAG
CCCGGCGCCT ATGCCTTCAT CGGCAACGGC GACGGCACGC ACCGCGACGT GCACCACGGC
GAAGGGCCCT GCACGCTGCA CAACGCGAGC TACGACTTCA ACGACGAGCT CATTCCGCTG
GGCGCCACCT GCTGGGTGCA ACTGGCCGAG CAGTTCCTCG GCAAGCCCGG GGGAGCTGCG
CCTTGA
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| Protein sequence | MKLIDSLVTQ AAGIAAVRRD LHAHPELCFE EVRTADVVAG KLTEWGIPIH RGLGTTGVVG
IVKNGTSTRA VGLRADMDAL PVTELNTFAH ASKHHGKMHA CGHDGHTAML LAAAQHLAKN
RNFDGTVYLI FQPAEEGGGG AREMIKEGLF EQFPMDAVFG MHNWPGMKAG QFAVSPGPVM
ASGNKFYVNV IGKGGHAALP QTGIDPVPIA CEIVQAFQTI LTRKMKPTDS AVISVTTIHA
GETNNVIPDN CELTGTVRTF SIEVLDMIES RMRQIAEHIC AAHDATCDFR FERYYPPTIN
TEAEANFARR VMGGIVGPEN VLRQEAAMTS EDFAFMLQAK PGAYAFIGNG DGTHRDVHHG
EGPCTLHNAS YDFNDELIPL GATCWVQLAE QFLGKPGGAA P
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