| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0331 |
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| Symbol | |
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| ID | 7973475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 355175 |
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| End bp | 356341 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790934 |
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| Product | acetylornithine deacetylase (ArgE) |
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| Protein accession | YP_002942260 |
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| Protein GI | 239813350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCCTA CGCTTTCCCC CCAGAGCCTC GCGCTGGCCC AGACGCTGGT GCGCATGAAC
ACCGTCAGCG AAAACAGCAA CCTGCAGCTG ATCGACCTCG CGCAAAGCCA CCTGGCCGCG
CTGGGCGTGA AGAGCCGCAT CACCTACAAC GCCGAGCGCA CCAAGGCCAA CCTGTTCGCC
ACCCTCGGCG AGGGCAAGCC GGCCGGCGTG ATCATCTCGG GCCACACCGA CACGGTACCG
TGGGACGGGC AGGACTGGAG CGTCGACCCG CTCTCCGCCG CGGTGCAGAA CGAACGCCTC
TACGGCCGCG GCTCGGCCGA CATGAAGAGC TTCATCGCCA TCGCGCTGTC CAATGCCCGG
CGCTTCCTCG AAAGCGACTC GCCCTTCGCG GTGCACTTTG CCTTCAGCTA CGAGGAAGAG
ATCGGCTGCT TCGGCGTGAA GGAACTCATC GCCGACATGC GCGACGCCGG CATCAAGCCG
CTCGCCTGCA TCGTGGGCGA GCCCACCAGC ATGGTGCCGG CCATCGCGCA CAAGGGCGTG
TACCGCTACC GCTGCTGCGT GCGCGGCAAG GAGGCGCATT CCTCGCTCAC GCCCAAGTCG
GTCAATGCCA TCGAGATGGC CGCGCGCGTG GTCGGCAAGG TGCGCGACAT GGCCGAAGGC
TTCGAGCGCA GCGAACCGCG CTACGAGGGC TTCGACGTGC CCTTCAGCAC CGCGAGCGTG
GGCCAGTTCC ACGGCGGCAT TGCCGACAAC GTGGTGCCGC GCGACGCCGA GTTCCGCTAC
GAATTCCGCG ACCTGCCGAC CGCCGACGCA AAAAAGATGC AGGACGAGGT CGTCTCCTAT
GCCGGCAGCC TCGAGGCGTC GATGAAGAAG GTGGCGCCCG ATGCGGGCTT CCGCTTCGAG
ACCATCTGCG AGATCCCGAG CTTCCTCGGT GCGGCTACGG ATCCGGTCAC GCTGCTCGCG
CAGCGCCTCG CGGGCGAGGA CCGCACCACG CTGGTGGCCT TCGGCACCGA GGCGGGCCTG
TTCAAGAACG CCGGCATCCC CACCGTGGTG TGCGGCCCGG GCAGCATCGA GCAGGCGCAC
CAGCCCGACG AGTTCGTGAG CCTGGAGCAG CTGGCGCGCT GCGAACTGTT CATGCAGCGC
CTTGCCGCCA CGCCGACCAT TGGCTGA
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| Protein sequence | MSPTLSPQSL ALAQTLVRMN TVSENSNLQL IDLAQSHLAA LGVKSRITYN AERTKANLFA
TLGEGKPAGV IISGHTDTVP WDGQDWSVDP LSAAVQNERL YGRGSADMKS FIAIALSNAR
RFLESDSPFA VHFAFSYEEE IGCFGVKELI ADMRDAGIKP LACIVGEPTS MVPAIAHKGV
YRYRCCVRGK EAHSSLTPKS VNAIEMAARV VGKVRDMAEG FERSEPRYEG FDVPFSTASV
GQFHGGIADN VVPRDAEFRY EFRDLPTADA KKMQDEVVSY AGSLEASMKK VAPDAGFRFE
TICEIPSFLG AATDPVTLLA QRLAGEDRTT LVAFGTEAGL FKNAGIPTVV CGPGSIEQAH
QPDEFVSLEQ LARCELFMQR LAATPTIG
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