| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0307 |
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| Symbol | |
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| ID | 7972656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 328398 |
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| End bp | 329249 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790910 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942236 |
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| Protein GI | 239813326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGCA AGGCCACGCC CTGGTGGCTG TCGGGGCCCG CGCTACTGCT GTTCGCAGCC
CTGCTGGTGG TGCCGCTCGC GCTCACCGCA GTGCTGTCGT TCAACGTCTA CGACCCGGCC
ACGGGGCCGA AGGCCGGCGA GTTCACGCTC GCGCACTACG CCCAGGTGTT CACCGACTCG
TACTACCACG GCATCTTCTG GCGCACCTTC TGGATCTCGG CCCTCGTCAC CCTGATCTGC
GTGCTGGTCG GCGCGCCCGA GGCCTACGTG CTGAGCCGCA TGCGCAACCC GTGGCGCTCG
GTGCTGCTGC TGGTGGTGCT GGCGCCGCTT TTGGTGTCGG TGGTGGTGCG CGCCTTCGGC
TGGAGCATGC TGCTCGGGCC CGAAGGCGCA GTGAACGGGC TGCTGCGGCT GGTGGGCATC
GGGCCGGTGA AGATGCTCTA CACCGAGACC GCGGTGATCG TCGCGCTGGT GCACGTGATG
CTGCCCTTCA TGGTGATTCC GGTCTGGACC TCGCTGCAGA AGCTGGATGC GGGCGTGGAG
AACGCGGCGC TCTCGCTCAG GGCCTCGCCC TTCACCACGC TGCGGCGCAT CGTGCTGCCG
CAGGTGATGC CGGGCATTCT CTCGGGCAGC TTGATCGTGT TCGGCCTGGC TGCGAGTTCG
TTCGCGATTC CGGGGCTGCT GGGCGGGCGC CGATTGAAGA TGGTGGCGAC GGTGGTCTAT
GACGAGTACC TGAGCGAGCT CAACTGGCCG CTCGGCGCTG CTGTCGCGCT GACGCTGCTC
GTAGCCAACC TCATCGTGAT GCTGAGCTAC AACCGGCTCG TCGAAGGCCG CTACAAGAAG
GCATTGGGGT GA
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| Protein sequence | MKSKATPWWL SGPALLLFAA LLVVPLALTA VLSFNVYDPA TGPKAGEFTL AHYAQVFTDS
YYHGIFWRTF WISALVTLIC VLVGAPEAYV LSRMRNPWRS VLLLVVLAPL LVSVVVRAFG
WSMLLGPEGA VNGLLRLVGI GPVKMLYTET AVIVALVHVM LPFMVIPVWT SLQKLDAGVE
NAALSLRASP FTTLRRIVLP QVMPGILSGS LIVFGLAASS FAIPGLLGGR RLKMVATVVY
DEYLSELNWP LGAAVALTLL VANLIVMLSY NRLVEGRYKK ALG
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