| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0300 |
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| Symbol | |
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| ID | 7972649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 320670 |
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| End bp | 321575 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644790903 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942229 |
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| Protein GI | 239813319 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCG CCGCCTTGGA CCTCCAGATT CTGCGTGCCT TCGTGCTGGC GGCGCGCGAG
GGCAATGTGT CGCGCGCGGC CGAGCGGCTG CACCTGACGC AGCCGGCGGT GAGCCTGCAG
CTCAAGCGCC TGGCGGAGGA AACCGGGCTG CAGCTCTTCA CGCGCACGCC GCACGGGCTG
GCGCTCACGG CCGACGGCGC CGCGCTGCTG CCGCAGGCCG AGCGCGTGCT CGCGGCCGTG
GGCGACCTGC AGCAGGCCGC GCGCAACCTG CAGGGCACGG TGCGCGGGGC GCTGCGCATC
GGCACCATCC TCGACCCGGA GTTCACGCGG CTCGGCGTTT TCCTGCGCGA GCTGGTGGAG
TCGGCCCCGC AGATCGAGAC CGAGCTGCGC CACGGCATGA GTGGCACGGT GCTGGCCCAG
GTGCTGCGCG GCGAGCTCGA CGTGGGCTTC CACCTCGATG CGGACGGGGG CGATGCCGCC
ACGCCGGCGC CGCTCGCGGC GCGCACGCTC ACGCGCTTCA CCTACCGCGT GGTCGCGCCC
GCGGGCTGGG GCCCGCAGGT GCTGGGCCGC GACTGGAAGG CGCTGGCCGC GCTGCCCTGG
CTGGCCACGC CGCCCGAGTC GGCGCACCAC CAGCTGCTGG AAAAAGTGTT CGGCCCGCTC
GGGCTGTCGC CGCGCCGCGT GGCGTTGGTG GACCAGGAGG CCTCGATGCT CGACCTGCTG
AAATCGGGCG TGGGCCTGAG CCTGCTGCGC GACTCGATCG CCATCCGCGA GAGCCAGTCG
CACGGCCTCG TGATGGCCGA CCGCGTGCAG CTGGACTGCG CGCTGCGCTT CGTCTCGCTG
GCGGCGCGGC GCAACGAGCC GGTGATCGCG AGCGCATGGA ACGCGCTCGC GCGGGCCTGG
AACTGA
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| Protein sequence | MTAAALDLQI LRAFVLAARE GNVSRAAERL HLTQPAVSLQ LKRLAEETGL QLFTRTPHGL
ALTADGAALL PQAERVLAAV GDLQQAARNL QGTVRGALRI GTILDPEFTR LGVFLRELVE
SAPQIETELR HGMSGTVLAQ VLRGELDVGF HLDADGGDAA TPAPLAARTL TRFTYRVVAP
AGWGPQVLGR DWKALAALPW LATPPESAHH QLLEKVFGPL GLSPRRVALV DQEASMLDLL
KSGVGLSLLR DSIAIRESQS HGLVMADRVQ LDCALRFVSL AARRNEPVIA SAWNALARAW
N
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