| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0298 |
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| Symbol | |
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| ID | 7972647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 318540 |
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| End bp | 319358 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790901 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942227 |
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| Protein GI | 239813317 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.510066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACT CTTCGGTCGT CGTCGACATC CGCAAGCTCT GGACGGTGTT CAAGAGCGCC
GACGGCGAGG TCGTGGTGCA CCGCGACCTC GAGCTGCGCA TCGAGCGCGG CGAGGTGCTG
TCGCTGGTGG GCGGCTCGGG CACCGGCAAG ACGGTGCTGC TGCGCCAGAT CCTCGGGCTC
GAGAAGCCGA CCAAGGGCAC GGTCGAGGTG CTGGGCCAGG CGCCCGGCGA ACTCAGCGCC
AAGGGCGCGG CCAACGTGGG CATGCTGTTC CAGCACGGCG CGCTGTTCTC GGCCTTCAGC
GTGCTCGAGA ACATCGCCTT TCCGCTGCGC GAACTCAAGC TGCTGCCCGA CGAGCTGATC
CGCAACGCGG CGCTGGTCAA GCTGCAGATG GTGGGCCTGG AGCCGCGGCA TGCCAACATG
AGCCCGGCCG ACCTCTCGGG CGGCATGATC AAGCGCGTGG CGCTGGCGCG CGCGCTCATC
ATGGACCCGC CGCTGCTGCT CCTGGACGAA CCCACCGCGG GCCTGGACCC CGAGGCCTCC
GACAGTTTCT GCGACCTGCT GCGCGGCCTG CACCGCGAGC TGGGCCTGAC GGTGGTGATG
GTCACGCACG ACCTGGACAC CCTGTTCGAC CTGAGCACCC GCATCGCGGT GCTGGCCGAC
CACAAGGTCA TCGTCAGCGG CTCGGCGCGC GAGGTGATCG CCTATCCGCA TCCGTTCATC
CACGAATATT TCCTGGGCGG GCGCGGCCAG CGCGCGCTGG AGGCCCTGCA TGACAAACCC
GCCAACGCCG CGCCGGCCCC CGCCGGCGCG GCCCGCTGA
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| Protein sequence | MNDSSVVVDI RKLWTVFKSA DGEVVVHRDL ELRIERGEVL SLVGGSGTGK TVLLRQILGL
EKPTKGTVEV LGQAPGELSA KGAANVGMLF QHGALFSAFS VLENIAFPLR ELKLLPDELI
RNAALVKLQM VGLEPRHANM SPADLSGGMI KRVALARALI MDPPLLLLDE PTAGLDPEAS
DSFCDLLRGL HRELGLTVVM VTHDLDTLFD LSTRIAVLAD HKVIVSGSAR EVIAYPHPFI
HEYFLGGRGQ RALEALHDKP ANAAPAPAGA AR
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