| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0294 |
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| Symbol | |
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| ID | 7972643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 315840 |
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| End bp | 316589 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790897 |
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| Product | Silent information regulator protein Sir2 |
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| Protein accession | YP_002942223 |
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| Protein GI | 239813313 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.4176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCC TGGGCACCGC TTCCTCTTCC ACATCGCCCG TCGAATCCGC CATTGCCCTC
CTGGGCGCCG CCCGGCGCAT CGCCGTGCTG TCGGGCGCGG GGCTGTCCAA GGCCTCGGGC
ATTTCGACCT ACCGCGACGC CGACGGCCTC TGGATGAACC AGAACGCGCT GCAGTTCTCC
CATGCCGAAG ACCTGCAGCG CGACCCCAGG AGATTCACCC GCTTCTGGGC CCGGCGGCTT
TCCACCGTCG AGGCCGCGCA GCCGAACCCC GGCCATGCGG CGCTCGCACT GCTGCAGCGG
CTGCGCCCCG CCACGCGGCT CGTCACGCAG AACGTCGACG GCCTGCTCTC GATCGCGGGC
GGGCTGGACG TGCTCGAACT GCACGGCTCG CTGCGCCGCT GGCGCTGCGA CCACTGCGGC
AACCGCCGCG GGCCCTGGCC CTTTCACCGC TGCATGCGCT GCGCCTCGCG CGCCCGGCCC
GACGTCGTGA TGTTCGGCGA GATGCTGAAC CCAGGCGTGC TGCACGACGC CCAGGTGGCG
GCGCAGGAAT CGGACGTGTT CATGGTGGTC GGCAGCACGG CGGTGGTCTA CCCGGCGGCC
GAGCTGCCGC AGCTGGCGAT GTCGCGCGGC GCGCGGCTGA TCACGCTCAA CATGGAGCCG
CTGCCGCAGC TGGACGCGGC GGCTGCGGTG GTCCTGCGCG GCGCGGCGGA GGTTCTTCTG
CCGCGGCTCC TGGCGGGGAT CGGCGGCTGA
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| Protein sequence | MSSLGTASSS TSPVESAIAL LGAARRIAVL SGAGLSKASG ISTYRDADGL WMNQNALQFS
HAEDLQRDPR RFTRFWARRL STVEAAQPNP GHAALALLQR LRPATRLVTQ NVDGLLSIAG
GLDVLELHGS LRRWRCDHCG NRRGPWPFHR CMRCASRARP DVVMFGEMLN PGVLHDAQVA
AQESDVFMVV GSTAVVYPAA ELPQLAMSRG ARLITLNMEP LPQLDAAAAV VLRGAAEVLL
PRLLAGIGG
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