| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0293 |
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| Symbol | |
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| ID | 7972642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 314980 |
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| End bp | 315843 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790896 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002942222 |
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| Protein GI | 239813312 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.689557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCCA ATGACAACGA CCGCGCCGCC CAGCGCGGCA TCCAGAGCAT CGAAGTGGGT
GGCCAGCTGC TGCGCGCGCT GGTGCACCAC GGCCGGCCGA TGGCGCTGAA AGACCTGGCG
CGCGAAGCCG ACATGACGGC CGCCAAGGCC CATCCGTACA TGGTGAGCTT CGGGCGGCTC
GGCCTGATCG AGCAGGACCG CGCCAGCGGC CACTATCTGC TCGGCCCGCT GGCCTTGCAA
CTGGGGCTCA TCAGCCTGCA GCAGGCCGAC CCGGTGCACA TTGCGACGCC GCTGATCGCC
GAGGTGGCGC AGCGCATCGG CCACACGGTG GCGCTCGCGG TCTGGGGCGC GCGCGGCGCC
ACCATCGTGC GCACGGCCGA ATCGCCGTCG CCGGTGCACG TGAACATGCG TCACGGCACG
GTGTTCTCGC TCACCAACAC GGCCTCGGGC CGGGTCTTTG CCGCCTACCT GCAGGCCGAT
GCGGTGCGGC AGCTGCTCGA CGCCGAGCGC CAGCGCCAGA AGCAGCGCAA GGCCGGCGAA
GAGCCGCCCG TGGCCGGCAT GCCGCCGCAG CCGCCGCTGC CTTCGTGGAG CGAATTCGAA
CGCCAACTGC AGGAAGTGCG CGCGCACGGC ATCAGCCGCT CCGAAGGCGA GGTGATCGAG
GGCGTGAGCG CCATGGCGGC GCCGGTGTTC GACCACACGG GCGCCATCGT GCTGTCGGTC
ACGGCCATCG GCCCGGCCGC CATCTTCGAC ACCGCCTGGG ACGGCGAAAT CGCACGCGCG
CTCAAGGCCT GCGCGGGCAC GGTGTCCGCG CGGCTGGGCG CAACGTCTGG CGGAAGAAAG
GCTTCCGCAC CGCTGGATCC ATGA
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| Protein sequence | MAANDNDRAA QRGIQSIEVG GQLLRALVHH GRPMALKDLA READMTAAKA HPYMVSFGRL
GLIEQDRASG HYLLGPLALQ LGLISLQQAD PVHIATPLIA EVAQRIGHTV ALAVWGARGA
TIVRTAESPS PVHVNMRHGT VFSLTNTASG RVFAAYLQAD AVRQLLDAER QRQKQRKAGE
EPPVAGMPPQ PPLPSWSEFE RQLQEVRAHG ISRSEGEVIE GVSAMAAPVF DHTGAIVLSV
TAIGPAAIFD TAWDGEIARA LKACAGTVSA RLGATSGGRK ASAPLDP
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