Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0292 |
Symbol | |
ID | 7972641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 313876 |
End bp | 314835 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644790895 |
Product | beta-lactamase domain protein |
Protein accession | YP_002942221 |
Protein GI | 239813311 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.540358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAG CCAAGAAGTT CGCCAGCCAG GCCGACATGG AAGAGAAGAA GATCACCTTC AGCCAGATCT CGGAACACGC CTGGGCCTAC ACGGCCGAGG GCGACCCCAA CACCGGCATC GTGATCGGCG ACGATTGCGT GCTGGTGGCC GACACCCAGG CCACGCCGGC CATGGCGGCC GACGTGGTGC GCCGCATCCG CGAAGTGACC GACAAGCCGA TCAAGTACGT GGTGCTCACG CACTACCACG CGGTGCGCGT GCTGGGCGCG GCCGGCTACG GTGCCGAGCA CATCCTGGCC AGCCAGGACA CGCGCGACCT GATCGTGGAG CGCGGCGAAG CCGACAAGGC CAGCGAGATC GGCCGCTTCC CGCGCCTGTT CCAGAACGTC GAGACGGTGC CGCCGGGCCT GACCTGGCCC ACCATGACCT TCACCGGCAA GATGACGCTG TGGCTCGGCA AGCTCGAGGT GCAGCTGATC CAGCTGGGCC GCGGCCACAC CAAGGGCGAC ACCGTCGTCT GGCTGCCCGG GGAGCGCACG CTGCTGTCGG GCGACCTGGT CGAGTTCGGC GCCACGCCGT ATGCGGGCGA CGCCTACTTC CAGGACTGGC CGCAGACGCT GGACAACATC GCCGCGCTCA AGCCCGCCGC GCTGGTGCCC GGCCGCGGCG CCGCGCTCAC CACGCCGGCC GAAGTGGCCG AGGGCCTGGC CGGCACGCGC AACTTCATCT CCGACGTGTA CGCGAGCGTG CAGGAAGGCG TGAAGGCCGG GCGCGACCTG AACACGGTCT ACAAGGACAC CTACGCCAAG CTCAAGCCCA AGTACAGCCA GTGGGTGATC TTCGACCACT GCATGCCCTT CGACGTGAGC CGCGCGTACG ACGAGGCCTC GGGCCATGCC GATCCGCGCG TGTGGACGGC CGAGCGGGAC ATCGAGATGT GGAAGGCACT CGAGGGCTGA
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Protein sequence | MSQAKKFASQ ADMEEKKITF SQISEHAWAY TAEGDPNTGI VIGDDCVLVA DTQATPAMAA DVVRRIREVT DKPIKYVVLT HYHAVRVLGA AGYGAEHILA SQDTRDLIVE RGEADKASEI GRFPRLFQNV ETVPPGLTWP TMTFTGKMTL WLGKLEVQLI QLGRGHTKGD TVVWLPGERT LLSGDLVEFG ATPYAGDAYF QDWPQTLDNI AALKPAALVP GRGAALTTPA EVAEGLAGTR NFISDVYASV QEGVKAGRDL NTVYKDTYAK LKPKYSQWVI FDHCMPFDVS RAYDEASGHA DPRVWTAERD IEMWKALEG
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