Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0286 |
Symbol | |
ID | 7972635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 306258 |
End bp | 308225 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644790889 |
Product | penicillin-binding protein 2 |
Protein accession | YP_002942215 |
Protein GI | 239813305 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.54247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAA TCCGCAACGT CGCTGCCGAC CTCGCGCGCT TCAAGCGCCG CGTGGTCGTG ATCGGCCTGG CGGTGCTGTT TGCCTTCAGC CTGCTGTGCG CGCGGCTGGT GTACCTGCAG GTGGTGCGCC ACGAAGACCT GGCGGAGCAG GCCGAGAGCA ACCGCACGGC CATCGTGCCC GTGGTGCCCA ACCGCGGCCT GATCCTCGAC CGCAACGGCA TCGTGCTGGC CTCCAACTAT TCGGCCTACA CGCTGGAGAT CACGCCTTCG AAGGTGGGCG ACGTCGAGGA GACCATCGAA AGCCTGACCC AGGTGCTCGA GATCTCGCCG CGCGACCGCC GCCGCTTCAA GCGCCTGCGG GAAGACTCGC GCAGCTTCGA TTCCATTCCG ATCCGCACCC GCCTGAGCGA CGAGGAGGTC GCGCGCTTCG CTGCGCAGCG CTACCGCTTC CCGGGCGTGG AGATCAAGGC CCGGCTGTTC CGCAACTACC CGCACGCCGA GCTGGCCTCG CACGTGCTTG GCTACATCGG CCGCATCAAC CAGCGCGAGA AGACCGCGAT GGAAGACTGG GACGAGGAAG ACCAGGCCAA CTACAAGGGC ACCGACTACA TCGGCAAGCT CGGCATCGAG CAGAGCTACG AGAAGACGCT GCACGGCCAG ACCGGCGTCG AGCAAATGGA AACCTCGGCC GGCGGCCGCG CGGTGCGCCG GCTCGCCAGC CACCCGGCCA CGCCCGGCAA CACCGTGATG CTGTCGCTCG ACATCAAGCT GCAGAAGCTG GTGGAAGACA TGTTCGGCGA CCGCCGCGGC GCGCTGGTGG CCATCGACCC CAAGTCCGGC GAGGTGCTGG CCTTCGTGAG CAAGCCCACC TTCGACCCCA ACCTGTTCGT CGAAGGCATC GACACCGAGA GCTGGCAGGC GCTGACCGAA TCGCTCGACA AGCCGCTTTT GAACCGCGCG CTGCGCGGCA CCTACCCGCC CGGCTCCACC TACAAGCCCT TCATGGCGCT TGCGGCGCTG CAGACCGGCA AGCGCGGCCC CAACGTGGTG GTGAACGATC CTGGCTACTT CAACTTCGGC GGCCACCGCT TCGGCAGCCC CGAGGGCAAC ATCGGCGGCG TCGACATGCG CCGCTCGATC CAGCTGTCGA GCAACATCTA CTACTACTCG CTGGCCAATG AAATGGGCGT GGACCTGATC CACGACTTCA TGAAGCCGCT GGGCTTCGGC CAGATCACCG GCATCGACCT GGGCGGCGAG GTGCGCGGCG TGCTGCCGAG CACCGAGTGG AAGCGCAACG CCTACAAGCG GCCCGAGCAG AAGAAGTGGT ATGCGGGCGA GACCATCTCG CTGGGCATCG GGCAGGGCTA CAACGCCTTC ACGATGCTGC AGCTCGCGCA GGCCACCTCC ATCGTGGCCG ACGGTGGCCG CAAGCACAAG CCGCACCTCG TGCTGGCCAC GCGCAACACC GTGAGCGGGC AGGTGGTGCC GCTGCCCCAG CCGCCGGCCG AGAACCTGGG CTATTCCGCG GCCAACGTCG CGGTGGTCCG CGAGGGCCTG ACCAGCGTGG TCACCAGCGG CACTGCGCGC GGCGTGTTCG CCGGCGCGGG CTACCAAGCG GCCGGCAAGA CCGGCACCGC GCAGGCCGTG ACGCAGGCGC AGAACACCAA GTACAACGCG CGCGCGCTCG AGGAGCACCA GCGCGACCAC GCGCTGTTCA TGGCCTTTGC GCCGGTCAAC GATCCGAAGA TCGCGCTCGC GGTGATCGTC GAGAACGCCG GCTGGGGCGC AGGCGCGGCG GCGCCCATTG CGCGCCGCGT GTTCGACTAC TGGCTGATGG ACCAGTATCC GAGCGAGGCC GACATGGCCG CCATCAAGGT CGGCAAGGCC ACCGCCCCGA TCGGCAAGCC GCGCGTGGCC AGCGAAGTGG CTTGGCCGGC AGCGTCGGCC GCCGCAACCG CACCCTGA
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Protein sequence | MTEIRNVAAD LARFKRRVVV IGLAVLFAFS LLCARLVYLQ VVRHEDLAEQ AESNRTAIVP VVPNRGLILD RNGIVLASNY SAYTLEITPS KVGDVEETIE SLTQVLEISP RDRRRFKRLR EDSRSFDSIP IRTRLSDEEV ARFAAQRYRF PGVEIKARLF RNYPHAELAS HVLGYIGRIN QREKTAMEDW DEEDQANYKG TDYIGKLGIE QSYEKTLHGQ TGVEQMETSA GGRAVRRLAS HPATPGNTVM LSLDIKLQKL VEDMFGDRRG ALVAIDPKSG EVLAFVSKPT FDPNLFVEGI DTESWQALTE SLDKPLLNRA LRGTYPPGST YKPFMALAAL QTGKRGPNVV VNDPGYFNFG GHRFGSPEGN IGGVDMRRSI QLSSNIYYYS LANEMGVDLI HDFMKPLGFG QITGIDLGGE VRGVLPSTEW KRNAYKRPEQ KKWYAGETIS LGIGQGYNAF TMLQLAQATS IVADGGRKHK PHLVLATRNT VSGQVVPLPQ PPAENLGYSA ANVAVVREGL TSVVTSGTAR GVFAGAGYQA AGKTGTAQAV TQAQNTKYNA RALEEHQRDH ALFMAFAPVN DPKIALAVIV ENAGWGAGAA APIARRVFDY WLMDQYPSEA DMAAIKVGKA TAPIGKPRVA SEVAWPAASA AATAP
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