| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0281 |
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| Symbol | gatA |
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| ID | 7972630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 301575 |
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| End bp | 303062 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790884 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_002942210 |
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| Protein GI | 239813300 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0404331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCG AATTGCACCA GATGGGCGTG GCTGACCTGG CCAAGGCATT GGCCGAGCGC
AAGGTTTCGG CCGTCGAGGC CTCGCAGGTC TTCCTGGGCC GCATGAAGGC CCACGAATCG
CTCGGCACCT TCGTCGACGT GAACGAAGAC GTCACGCTGG CCCAGGCCCG CGCGGCCGAC
GCGCTCATTG CCAAGGGCAA CGCGCCGGCG CTGGCCGGCG TGCCGATCGC GCACAAGGAC
ATCTTCGTCA CCACCGATTT CGCCACCACC GCCGGCTCCA AGATGCTCGC GGGCTACCGC
TCGCCCTTCG ACGCCACCGT GGTGCGCCGC CTGGCCGAGG CCGGCGCGGT CACGCTGGGC
AAGCTCAGCT GCGACGAATT CGCGATGGGC TCGGCCAACG AGAACGTCGC CGTGCCCGCC
GTGGGCCACG ACAAGGCCGT GCCGGTGCAG AACCCGTGGA ACCGCGAGCG CATTCCGGGC
GGCTCCTCGG GCGCCAGCGC GGCGGCCGTG GCGGCGCGCC TGGCCCCTGC GGCCACCGGC
ACCGACACCG GCGGCTCGAT CCGCCAGCCG GCCTCGTTCT GCGGCATCAC CGGCATCAAG
CCGACCTACG GCCGCGCCTC GCGCTACGGC ATGGTGGCCT TCGCATCGAG CCTCGACCAG
GCCGGCCCGA TGGCCCGCTC GGCCGAAGAC TGCGCGCTGC TGCTGTCGGC CTTCTGCGGC
CCCGACCTGG ACCGCGACTC GACCTCGCTC GACAAGCCCG CCGAAGACTT CGGCCGTTCG
CTCGGCGATT CGCTCGAAGG CCTGCGCATC GGCGTGCCGA AGGAGTTCTT CGGCGAAGGC
GTGGCACCCG GCGTGCGCGC GGCCATCGAT GCGGCCCTTG TGCAGTACGA GAAGCTCGGC
GCCAAGCGCG TCGAGGTGTC GCTGCCGCTC ACCGAGCTGT CGATTCCCGT GTACTACATC
CTGGCCGCGG CCGAAGCCTC GAGCAACCTG AGCCGCTTCG ACGGCGTCAA GTTCGGCCAC
CGCGCCAAGC AGTACAAGGA CCTGGCCGAG ATGTACGAGC GCACGCGCGC CGAAGGCTTC
GGCGACGAGG TGAAGCGCCG CATCATGATC GGCACCTACG TGCTGAGCCA CGGCTACTAC
GACGCCTACT ACCTGCAGGC GCAGAAGGTG CGCCGCATGA TCGCCGACGA CTTCCAGCAG
GCCTTCAGGC AGTGCGACCT GATCGCCGGC CCGGCCGCGC CGACCACCGC CTGGAAGATC
GGCGAGCACG GCGGCGATCC GGTGGCCGAC TACCTGGCCG ACATCTTCAC GCTGCCTGCC
TCGCTGGCCG GCCTGCCGGG CATGAGCGTG CCCGCGGGCT TCGACGCCGG CATGCCCGTC
GGCCTGCAGC TGATCGGCAA CTACTTCGGC GAAGCGAAGC TGCTGAACGC AGCCCACCGC
TTCCAGCAAG CCACCGACTG GCACATGCGC ACGCCGGAGG GCTTTTGA
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| Protein sequence | MSGELHQMGV ADLAKALAER KVSAVEASQV FLGRMKAHES LGTFVDVNED VTLAQARAAD
ALIAKGNAPA LAGVPIAHKD IFVTTDFATT AGSKMLAGYR SPFDATVVRR LAEAGAVTLG
KLSCDEFAMG SANENVAVPA VGHDKAVPVQ NPWNRERIPG GSSGASAAAV AARLAPAATG
TDTGGSIRQP ASFCGITGIK PTYGRASRYG MVAFASSLDQ AGPMARSAED CALLLSAFCG
PDLDRDSTSL DKPAEDFGRS LGDSLEGLRI GVPKEFFGEG VAPGVRAAID AALVQYEKLG
AKRVEVSLPL TELSIPVYYI LAAAEASSNL SRFDGVKFGH RAKQYKDLAE MYERTRAEGF
GDEVKRRIMI GTYVLSHGYY DAYYLQAQKV RRMIADDFQQ AFRQCDLIAG PAAPTTAWKI
GEHGGDPVAD YLADIFTLPA SLAGLPGMSV PAGFDAGMPV GLQLIGNYFG EAKLLNAAHR
FQQATDWHMR TPEGF
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