Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0277 |
Symbol | |
ID | 7972626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 297883 |
End bp | 298686 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644790880 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_002942206 |
Protein GI | 239813296 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0273673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCAAAC TGACCAGCCT CAATCTCAAT GGCCTGCGTT CGGCCGCCAC GAAGGGGGTG GCGGACTGGG TGGCCGAACT TGCGCCGGAT TGTATTTGCA TGCAGGAGAT CCGGGTGCAG GCGAGCGACA TCGAAGGCCG TTTCGAGGAA ATGGCCGGCC TCAAGGGCCA TTTCCATTTC GCCGAGAAAA AAGGCTACGC CGGCACCGCG ATCTACACCC GCCACGCGCC GAGCGCCGTG GTGGTGGGCT GGGGCGATGC CGAATTCGAC GCCGAGGGCC GCTATCTCGA ACTGCGCTTC GACACGCCCC GGCGCAAGCT CTCGATCATC AGCTGCTACT TCCCGAGCGG CAGTTCGGGC GAAGAGCGGC AGGAAGCCAA GTTCCGCTTC CTGAAGGGCT TCTTTCCGCA CCTCACCGCG CTCAAGAAGG AGCGCGAATT CATCCTTTGC GGCGACATCA ACATCGCCCA CAAGGAAATC GACCTCAAGA ACTGGCGCGG CAACCAGAAG AACAGCGGCT TCCTGCCCGA GGAGCGCGCC TGGATGACCC GGCTGCTGGA CGCCGGCGCC GACGGCGCGG GCCTGGTCGA CGTCTACCGC CTGCTCAAGC CCGACACCAC GGGCGAGGCC TACACCTGGT GGAGCAACCG CGGCCAGGCC TACGCGAACA ACGTGGGATG GCGGCTGGAC TACCACCTGG CCACGCCGGC CCTGGGCGCG CTCGCGCGCA GCGAGCAGAT CTACAAGACC ATCAAGTTCA GCGACCACGC GCCGATCACG GTGGACTACG ACTTCACGCT GTAG
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Protein sequence | MFKLTSLNLN GLRSAATKGV ADWVAELAPD CICMQEIRVQ ASDIEGRFEE MAGLKGHFHF AEKKGYAGTA IYTRHAPSAV VVGWGDAEFD AEGRYLELRF DTPRRKLSII SCYFPSGSSG EERQEAKFRF LKGFFPHLTA LKKEREFILC GDINIAHKEI DLKNWRGNQK NSGFLPEERA WMTRLLDAGA DGAGLVDVYR LLKPDTTGEA YTWWSNRGQA YANNVGWRLD YHLATPALGA LARSEQIYKT IKFSDHAPIT VDYDFTL
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