| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0268 |
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| Symbol | |
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| ID | 7972617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 289455 |
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| End bp | 290288 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644790871 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942197 |
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| Protein GI | 239813287 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.27016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCA CGCCCGACAT CGTCGTCAAC GGCCCGGTGT ATGCCGACGT GCCCAGGCCC
GTCTTCAAGC CCGGCCCGGC CGGCACGCAC ATCACCATCC GCGGCCTGAC CAAGTACTTT
GCGGGCTGGC CGCTGTACGA GAACTTCGAC CTCGACATTC CCAAGCACCG GATCGTCTCG
GTGTTCGGGC CCAACGGCTG CGGCAAGTCC ACGCTCATCA ACATGATCGC GGGCCTGATC
CCGATCGATG CGGGCGAGAT CCTGTTCGAC GGCAAGCAGC GCAAGGACAC CAAGATCGGC
TACGTGTTCC AGAACTACCG CGAGGCGATG TTCCCGTGGA TGCGCACCAT CGACAACATC
GCCTACCCGC TGAAGCTCGA AGGCCGCAGC AAGGCCGAGG TCGACCGCCG CATGGAAGAG
CTGGTGGCGT CCTTCGACGT GAAGTTCGAC TTGAAGCGCT TTCCGTACGA GCTCTCGGGC
GGGCAGCAGC AGACCGCATC GATCATGCGC GCGCTCGCAC CCAAGCCCGA GGTGCTGTTT
CTGGACGAGC CCTTTTCGGC GCTCGACTTC GAGATGACGC TCTTCATCCG CGAGAAGCTG
CAGGAGGTGT TCATGCAGAC CGGCACCACC ATGCTCCTGG TGTCGCACGA CCTCGAGGAG
GCCGTGTACC TGGCCGACGA GGTGCTGCTG CTGACCAAGC GGCCCACCCG GGTGGCCGAG
ATCCTGCGCT ATGGCGATGC GCGGCCGCGC ACGGTCGAGA CCCTGAGCAC CGAGAGCTTC
GTGGCAACCA AGAAGCTCAG CCTCGACATC TTCCAGCGCG AGGTCCGCCG GTGA
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| Protein sequence | MKATPDIVVN GPVYADVPRP VFKPGPAGTH ITIRGLTKYF AGWPLYENFD LDIPKHRIVS
VFGPNGCGKS TLINMIAGLI PIDAGEILFD GKQRKDTKIG YVFQNYREAM FPWMRTIDNI
AYPLKLEGRS KAEVDRRMEE LVASFDVKFD LKRFPYELSG GQQQTASIMR ALAPKPEVLF
LDEPFSALDF EMTLFIREKL QEVFMQTGTT MLLVSHDLEE AVYLADEVLL LTKRPTRVAE
ILRYGDARPR TVETLSTESF VATKKLSLDI FQREVRR
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