Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0265 |
Symbol | |
ID | 7972614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 285894 |
End bp | 287603 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644790868 |
Product | allophanate hydrolase |
Protein accession | YP_002942194 |
Protein GI | 239813284 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.33811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTGC ATGAAGAAAA CGGATCGGCT GCCGCAGCGT GGATTGCCCG CTTTCCCCGG CCCGTGCCCG GCGCGGACGC GGGGCCTCTC GCCGGCCTGC GCTTCGCCGT CAAGGACAAC ATCGACGTGG CCGGCGTGCC CACCACGGCC GCCTGCCCGG CCTTCGACCG CCGGCCGGCT GAGCACTCGG CCGTGGTGCG GAAGCTGCTC GATGCCGGTG CATCGCTGCT CGGAAAGACC AACCTCGACC AGTTCGCCTG CGGCCTGAAC GGCACGCGCT CCCCGTATGG CGAAGTGCCC AATGCCTTCG ACGCGCGCTA CGTCTCGGGC GGCTCCAGTT CGGGCTCGGC CTACGTGGTG GCCGCCGGCG AGGCCGATTT CGCGCTCGGC ACCGACACCG CCGGCTCGGG CCGCGTGCCC GCCGGGCTCA ACAACATCGT CGGGCTCAAG CCCTCGCGCG GCCTGCTGAG CGCCTTTGGC GTGGTGCCCG CCGCCCAGAG CGCGGACTGC GTGTCGATCT TCGCGCGCAG CGTCGGCCTG GCCGTCGACG TGCTTCTTGC GGCCGCCGGG CCTGACGCGC GCGACCCTTA CTCGCGGGCA CTTGCGCTGC GCAGCCATCC GTTTCCGCCG GCCTTCCGTT TCGGCGTGCC CGACACGCTG AGCTTCTTCG GCGATGCCGC GGCCGAGCAA GCTTTTCGCG ATGCGCAGCT GCGGCTCGCC GAACTCGGCG GCACGGCCGT GGAAATTCCC TACGCGCCGC TGGCCGAGGC CGCCGCGCTG CTCTACGAAA GCGCGCTCGT GGCCGAGCGC TATGCGGCGG TGCGCGGGTT CTTCGATGCG CGCGGCTCCC AGGTGATCGA GCCGGTGCGC GGCATCCTCG AAAGCGGCCG CGGCTACAGC GCCGCCGATG TGTTCGAGGC GCAGACCCGG CTGCGTGCCA TTGCGCAGCA GGTCGAGCCG ATGTGGCGCG GCATCGACCT GCTGCTGGTG CCGACCGCGC CCACGCACTA CACGCGCGAG CAGATGCGCG CCGATCCCGT GGTGCTCAAC CGCAATCTCG GCGCGTACAC CAACTTCGTC AACCTGCTGG ACTACGCCGC CATCTCGGTG CCGAGCGCGC TGCGCGCCGA CGGCCTGCCC TTCGGCATCA CGCTGATCGG CCCGTGCGGC AGCGATCTTG CGCTGGCCGA GTTGGGCCAG CGCTATCACC ACGCCACCGG CCTGCCGCAG GGCGCCACGG GCTTGCCGCT GCCCGAGCCG CGCCCCATTC CGGGCCTGGG CGCTTCGCCG GTGCAGGCCA TGCCCATCGC CGTCGTCGGC GCGCACCTCT CGGGCATGCC GCTCAATGGC CAGCTCACCG AACGCGGCGC CACGCTGCTG CGTGCCACCA CCACCTCGCC GCACTACCGC CTGCACGCCT TGCCGGGCAC CGTGCCGCCC AAGCCGGGGC TGCAGCGCAG CACGGCCGGC GGAGCCGCTA TTGCGCTCGA AGTGTGGTCC GTTCCCGTGG CCGAGATCGG CAGCTTCCTC GCGCTGATCC CGCCCCCGCT GGGCCTGGGC AGCGTGGAGC TCGCCGACGG CAGCTGGGTG CACGGCTTCA TCTGCGAAGG CCATGCGCTC GCAGGCGCCG AAGACGTGAG CCACCACGGC GGCTGGCGTG CCTACATCGC GAGCCGCGCC GCGGCCTCTT CCCAAGCCAT TCCAACCTGA
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Protein sequence | MMVHEENGSA AAAWIARFPR PVPGADAGPL AGLRFAVKDN IDVAGVPTTA ACPAFDRRPA EHSAVVRKLL DAGASLLGKT NLDQFACGLN GTRSPYGEVP NAFDARYVSG GSSSGSAYVV AAGEADFALG TDTAGSGRVP AGLNNIVGLK PSRGLLSAFG VVPAAQSADC VSIFARSVGL AVDVLLAAAG PDARDPYSRA LALRSHPFPP AFRFGVPDTL SFFGDAAAEQ AFRDAQLRLA ELGGTAVEIP YAPLAEAAAL LYESALVAER YAAVRGFFDA RGSQVIEPVR GILESGRGYS AADVFEAQTR LRAIAQQVEP MWRGIDLLLV PTAPTHYTRE QMRADPVVLN RNLGAYTNFV NLLDYAAISV PSALRADGLP FGITLIGPCG SDLALAELGQ RYHHATGLPQ GATGLPLPEP RPIPGLGASP VQAMPIAVVG AHLSGMPLNG QLTERGATLL RATTTSPHYR LHALPGTVPP KPGLQRSTAG GAAIALEVWS VPVAEIGSFL ALIPPPLGLG SVELADGSWV HGFICEGHAL AGAEDVSHHG GWRAYIASRA AASSQAIPT
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