Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0264 |
Symbol | |
ID | 7972613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 284835 |
End bp | 285701 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644790867 |
Product | peptidase M48 Ste24p |
Protein accession | YP_002942193 |
Protein GI | 239813283 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.197309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCACAC GATGCGAGCT TCTTGCTGTT TCTTCCGCGG CTTCCTCGGC GCCGCGCGCC TCGGCCTGGC AGCCGCGGCG GGCCTTCCTG CTGGCGGCCG GCGCCGCGCT GGCCGGACCG GCCCTGGCGC AGGTTAACGT GGGCAATGCC TCGGTGGCGC GCAACCTGGT GCCGGCCGAC CGGATCGAAG CCGCCGGCGT GCAGCAGTAC GGCCAGCTGC TCGAGCAGGC GCGCGCCAAG CGTGCGCTCG CGGGCGACGG CAATGCGCAG CTGCAGCGGC TGCGCACCAT CGCGAACCGG CTGATTCCTT TTGCGACGCC GTGGAACGCG CGCGCGCGTG AATGGAAGTG GGAGGTCAAC CTGATCGGCA GCAAGCAGAT CAACGCCTTC TGCATGCCCG GCGGCAAGAT CGCCTTCTTC ACCGGCATCC TCGAACAGCT CAAGCTCAGC GACGACGAGG TCGCCATGGT GATGGGCCAT GAGATGGCCC ACGCGCTGCG CGAGCATGCG CGTGCCCGCA TGGCCAAGAG CGCGGGCACC GGCGCGGCGC TTTCCATCGG CGCGCAGCTG CTGGGCCTGG GCCAGATGGG CGATCTGGCG GCGCGCGCCG GCACGCAGCT GCTGACGCTC AAGTTCAGCC GCAGCGACGA GACCGAGGCC GATCTCGTCG GGCTCGAACT CGCGGCGCGC GCGGGCTACG ACCCGCAGGC CTCGGTGTCG CTCTGGAAGA AGATGGCCGC GGCATCGAAG AACCAGGGCG GCCTCGGCTT TCTGTCGACC CACCCGAGCG GGCCGGACCG GATCCAGAAG CTCGAGGCCA ACCTGCCGAA GGTCGAGGGG CTTTACCGGG AAGCCAAGCG TAGCTGA
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Protein sequence | MCTRCELLAV SSAASSAPRA SAWQPRRAFL LAAGAALAGP ALAQVNVGNA SVARNLVPAD RIEAAGVQQY GQLLEQARAK RALAGDGNAQ LQRLRTIANR LIPFATPWNA RAREWKWEVN LIGSKQINAF CMPGGKIAFF TGILEQLKLS DDEVAMVMGH EMAHALREHA RARMAKSAGT GAALSIGAQL LGLGQMGDLA ARAGTQLLTL KFSRSDETEA DLVGLELAAR AGYDPQASVS LWKKMAAASK NQGGLGFLST HPSGPDRIQK LEANLPKVEG LYREAKRS
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