| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0262 |
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| Symbol | |
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| ID | 7972611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 282054 |
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| End bp | 283256 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790865 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
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| Protein accession | YP_002942191 |
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| Protein GI | 239813281 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCCC GCATTTCTCC CCTTCAGATC AGCGCCTTCA CGGCCACTTC GGCCGTCGGC
GTCGGCAAGG AGCCGCTCGC CGAGGCGCTC GAGCATTCGC GCAGCGGCCT GCGCGCCAAC
GATTTCGGCG ATGCGCCGCT GCCCACCTGG ATCGGCCGGG TCGACGGGCT CGAGGACATC
CGCCTGCCCG AGGCGCTGGC CTCGTGGGAC TGCCGCAACA ACCGGCTGGC CTGGCTGGGC
CTGCATGCGG ATGGCTTTCC CGAGGCCGTG GCGGCCGCGC GGGCCAGGTA CGGCCCTTCG
CGCATCGCGC TGATCCTCGG CACCTCGACC TCCAGCATCG GCGAGACCGA GCTGGCCTAC
ACCCAGCTCG ACGCCGACGG CCGCTTTCCC ACGGACCAGC GGCGCCCGGC CGTGCACACG
CCGCATTCGC TGGCGATGTT CGTGCAGCAG GTGCTCGGGC TCAGCGGGCC GAGCGAGACG
ATTTCCACTG CCTGCTCGTC GAGCGCCAAG GTGTTTGCCT CGGCCGAGCG GCTGATCCGC
CTGGGCCTGG CCGACGCCGC CGTGGTGGGC GGGGTCGACA CGCTGTGCGG CAGCGTGCTG
TTCGGCTTCA ACTCGCTCGA ACTGGTGTCG AGCGAGCCGT GCCGGCCGTT CGATGCGAGC
CGCAAGGGCA TCAGCCTGGG CGAAGCGGCC GGCTTCGCGC TGGTGGAGCG CGTGCAGGAC
GACGCCGCCG CGCCGCTGCG GCTCCTGGGC TACGGCGAAG CCAGCGATGC GCACCACATG
TCGACGCCGC ACCCCGAGGG CCTGGGCGCC GAACGCGCGC TCGACGAGGC GCTGGCGCGC
GCGGGCCTCG CGCCCGAGGC CATCGACTAC ATCAACATGC ACGGCACCGC GAGCCAGAAG
AACGACGAGG TCGAAGGCGC GCTGGTGGCG CGGCGCTTCC CTGCCACCAC CCACGCCAGC
TCGACCAAGG GCTTCATGGG CCACACGCTG GGCGCAGCGG GCATCGTCGA ATCGGTGATC
AGCCTGCTCG CGATCGAGCG CGGCCTGATG CCGGGCACGG TCAACACGAG CCAGCTCGAC
GCCGGCTTCG GCCCGCAGAT CCGGCTCGCG CCCGCGCATG GCGAGGTGCG CTATGCGCTG
ACCAATTCCT TCGGCTTCGG CGGCAACAAC TGCTCGCTGG TCTTCGGCAA GGCAAAGGCA
TGA
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| Protein sequence | MPPRISPLQI SAFTATSAVG VGKEPLAEAL EHSRSGLRAN DFGDAPLPTW IGRVDGLEDI
RLPEALASWD CRNNRLAWLG LHADGFPEAV AAARARYGPS RIALILGTST SSIGETELAY
TQLDADGRFP TDQRRPAVHT PHSLAMFVQQ VLGLSGPSET ISTACSSSAK VFASAERLIR
LGLADAAVVG GVDTLCGSVL FGFNSLELVS SEPCRPFDAS RKGISLGEAA GFALVERVQD
DAAAPLRLLG YGEASDAHHM STPHPEGLGA ERALDEALAR AGLAPEAIDY INMHGTASQK
NDEVEGALVA RRFPATTHAS STKGFMGHTL GAAGIVESVI SLLAIERGLM PGTVNTSQLD
AGFGPQIRLA PAHGEVRYAL TNSFGFGGNN CSLVFGKAKA
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