| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0260 |
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| Symbol | |
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| ID | 7972609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 279380 |
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| End bp | 281086 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790863 |
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| Product | monooxygenase FAD-binding |
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| Protein accession | YP_002942189 |
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| Protein GI | 239813279 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.958147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCA CTGCGCAACG ATGTGACGCA GTGATCATGG GCGGCGGGCT CGCGGGCCTC
ACCCTCGCGC TGCAGCTGAA GCAGCGCTTC CAGGACATCG ACGTGCTGGT GCTGGAGCGC
CGCACGCACC CGGTGCCGCA TGCGGCGCAC AAGGTGGGCG AGTCGTCGGT CGAGATCGGC
GCGCACTACT TCGACACGGT GCTCGGCCTC AAGCCCCACA TGGACGGCGC GCAGCTGCGC
AAGTTCGGCT TCCGCTTCTT CTTCAGCGAG GGCCGGCGCG ACATCGACCA GGTCACCGAA
ATCGGCGCCA GCCGCTACCT GGCTGTGCCC AGCTACCAGA TCGACCGCGG CATCTTCGAG
AACTACCTGG CCGAGGAGGC CGTGCGGCGC GGCGTACGCT TCGACGATGC CGCGCTGGTG
CGCCGCGTCG AACTGGCCCC GGACGCCGAG GCGCCGCACC GCCTCGAATG GACGCGCGGC
AGCGAAACCC ACAGCGCCGA GGCGCGCTGG CTGGTCGATG CCTGCGGGCG CGCCGGCCTG
CTCAAGCGCA AGCTCGGCCT GGCCGAGGCC AATGCGCACG ACGTCAACGC CGTGTGGTTC
CGCATCGGCG AGCGCATTGC CATCGACGAG TGGAGCGACG ACGCCGCCTG GCGCGGGCGC
TGCGATCCGC AGGCGCGCTG GCTCTCGACC AACCACCTGG TAGGCGCGGG CTACTGGGCC
TGGCTGATTC CGCTGGCCTC GGGCTCGCAT TCGGTGGGCA TCGTGGCCGA CCCGAAGCTG
CACCCGCTGG ACACCATCGA CACCTTCGAC AAGGCCATGC GGTGGTTCGC CACCTACCAG
CCGCGGCTGT ACGACGCGCT CGACAGCAAG CGGCACCTGC TGCAGGACTT CGCGTTCCTC
AAGCACTTCT CGCACGGCTG CAGGCAGGTG TTCTCGGGCC GGCGCTGGGC CCTGACGGGT
GAGGCGGGCC TGTTCCTCGA CCCCTTCTAT TCGCCGGGCA GCGACTTCAT CGCGATCAGC
AACACCTACA TCGCCGACCT GGTGGCGCAC GACCGCGCGG GCCGCCCGGT GGAAGCGCGC
GCGCAGCTCT ACGACCAGAT CTACCACTCG TTCTACGAAA GCACGCTGGC GCTCTACCAG
GACCAGTACC CGCTGTTCGG CGACCCCGAG GTGCTGCCGG TGAAGGTGAT CTGGGACTAC
GCCTACTACT GGGGCGTGCT CTCGCAGATC TTCTTCCAGC AGCGGCTCAC CGACCTGGTG
CTGCTCGGCA GCCTGAAGGA CGAGCTGCAG CATTGCCAGC GCCTGAACCT CGCGGTGCAG
CAGCTGCTGC GCAGCTGGTC CGCGGCCAGC GCCAGGCGCA ACGCCCCGGT GATGCTCGAC
CAGGCCGCCA TGCCCTGGTT CGCCGAGCTC AACCGCAGCC TGAAGGACCC GCGGCTGGGC
GACGCCGCGT TCAGGGCGCG CATCCGGGCC TCGGCCGCGC AGCTGCGCCA GCTGGCCGGC
GAGATCCTCG CGCGCGCTCG GGCGGACAAT GCGGACCTGG GCGATTGCGC CCTGCCCTCG
CTGCTCGAGG AAAACATCGC CGCCCTGCCC GCCGGCGCGC AAGCCGGCGC TATGCTTTTC
GCAGCACTTC CGAATGACAG CCGGACGCGG CGTTTACCCA ACTTTACGGA GCGTTCAAGC
CCCGTTGCCC CCCGTGCACG ACCATGA
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| Protein sequence | MTGTAQRCDA VIMGGGLAGL TLALQLKQRF QDIDVLVLER RTHPVPHAAH KVGESSVEIG
AHYFDTVLGL KPHMDGAQLR KFGFRFFFSE GRRDIDQVTE IGASRYLAVP SYQIDRGIFE
NYLAEEAVRR GVRFDDAALV RRVELAPDAE APHRLEWTRG SETHSAEARW LVDACGRAGL
LKRKLGLAEA NAHDVNAVWF RIGERIAIDE WSDDAAWRGR CDPQARWLST NHLVGAGYWA
WLIPLASGSH SVGIVADPKL HPLDTIDTFD KAMRWFATYQ PRLYDALDSK RHLLQDFAFL
KHFSHGCRQV FSGRRWALTG EAGLFLDPFY SPGSDFIAIS NTYIADLVAH DRAGRPVEAR
AQLYDQIYHS FYESTLALYQ DQYPLFGDPE VLPVKVIWDY AYYWGVLSQI FFQQRLTDLV
LLGSLKDELQ HCQRLNLAVQ QLLRSWSAAS ARRNAPVMLD QAAMPWFAEL NRSLKDPRLG
DAAFRARIRA SAAQLRQLAG EILARARADN ADLGDCALPS LLEENIAALP AGAQAGAMLF
AALPNDSRTR RLPNFTERSS PVAPRARP
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