| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0251 |
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| Symbol | |
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| ID | 7972600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 271235 |
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| End bp | 272623 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790854 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_002942180 |
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| Protein GI | 239813270 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.336717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGG AAAAAACTCT CTTCGTCTGC AGCGAATGCG GCGGCACCAG CCCCAAGTGG
CTCGGCAAAT GCCCGAGCTG CGGCGCCTGG AACACACTCA TCGAACAGGT GGCGGGCGGC
AGCGGCCCGG CCAACAACCG CTTCGGCACG CAGTACGCCG CGCTGGCGGG CGTGTCGGAG
CTCGCAACCC TTTCCGAAAT CGAAGCGACC GACGTCGCGC GCACGCCCAC CGGGCTCGAC
GAGCTCGACC GCGTGCTGGG CGGCGGCATC GTCTCGGGCG GCGTCACGCT GATCGGCGGC
GACCCGGGCA TCGGCAAGTC GACCTTGCTG CTGCAGGCGG TCGATGCGCT GCAGCGCGCG
GGGCAGAACG CGCTCTACGT CACGGGCGAG GAAAGCGGCG CGCAGGTGGC GCTGCGTTCC
AGGCGGCTTG GCCTGGACCA CTCGCAGGTG CAGGTGCTGG CCGAGATCCA GCTCGAGAAG
ATCATCGCCA CGCTCGACGC CACGCGCCCG GCCATCGCGG TGATCGACTC GATCCAGACC
GTGTACTCCG ACCAGCTCAC CTCCGCGCCG GGCTCGGTGG CCCAGGTGCG CGAATGCGCG
GCCCACCTCA CGCGCTTTGC CAAGACCAGC GGCACGGCCG TGGTGCTGGT GGGCCACGTC
ACCAAGGAGG GCGCGCTTGC CGGACCGCGC GTGCTCGAGC ACATGGTCGA CACGGTGCTG
TACTTCGAGG GCGACACGCA TTCGAGCTTT CGCCTCGTGC GCGCCATCAA GAACCGCTTC
GGCGCCGTCA ACGAGATCGG CGTGTTCGCC ATGACCGAGC GCGGCCTGAA GGGCGTCGCC
AACCCGAGCG CGATCTTCCT GAGCCAGCAT GCCGAGCCGG TGCCCGGCAG CGTGGTGCTG
GTCACGCTCG AGGGCACGCG GCCGATGCTG GTGGAGATCC AGGCGCTGGT CGACAACGGC
GGGCCGAGCC CGCGCCGCCT CTCGGTAGGC CTGGACCGCG ACCGGCTCGC GATGCTGCTG
GCCGTGCTGC ACCGCCATGC GGGCGTGGCC TGCATGGACC AGGATGTGTT CGTGAACGCG
GTGGGCGGCG TGCGCATCAG CGAGCCCGCG GCCGACCTGG CCGTGATGCT CGCCATCACC
TCGAGCCTGC GCGGCAAGCC GCTGCCCAGG GGATTCATCG CATTCGGCGA GGTCGGCCTT
GCGGGCGAAG TGCGCCCCGC GCCGCGCGGC CAGGAGCGCC TGCGCGAAGC GGCCAAGCTG
GGCTTCAGCG TGGCCGTGGT GCCCAAGGCG AATGCGCCGC GCAAGGGCAC GAAGGAGATC
GAAGGTCTGA CGATCCATGC CGTAGAACGT ATCGAGGAGG CGATGGACGT GGTCCGCCGC
CTGGATTAA
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| Protein sequence | MAKEKTLFVC SECGGTSPKW LGKCPSCGAW NTLIEQVAGG SGPANNRFGT QYAALAGVSE
LATLSEIEAT DVARTPTGLD ELDRVLGGGI VSGGVTLIGG DPGIGKSTLL LQAVDALQRA
GQNALYVTGE ESGAQVALRS RRLGLDHSQV QVLAEIQLEK IIATLDATRP AIAVIDSIQT
VYSDQLTSAP GSVAQVRECA AHLTRFAKTS GTAVVLVGHV TKEGALAGPR VLEHMVDTVL
YFEGDTHSSF RLVRAIKNRF GAVNEIGVFA MTERGLKGVA NPSAIFLSQH AEPVPGSVVL
VTLEGTRPML VEIQALVDNG GPSPRRLSVG LDRDRLAMLL AVLHRHAGVA CMDQDVFVNA
VGGVRISEPA ADLAVMLAIT SSLRGKPLPR GFIAFGEVGL AGEVRPAPRG QERLREAAKL
GFSVAVVPKA NAPRKGTKEI EGLTIHAVER IEEAMDVVRR LD
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