| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0240 |
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| Symbol | |
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| ID | 7971449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 256794 |
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| End bp | 257597 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790843 |
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| Product | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
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| Protein accession | YP_002942169 |
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| Protein GI | 239813259 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | [TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACCG CCGACACCAT CGCCAGCCTC GCGGCCGAAC TGCACGAAAG CGAAAAGTCG
CGCGTTCAGG TCGAGCACTT CTCCAAGCGC TTTCCCGAAA TGACCATCGA GGACGGCTAC
GCCATCTCGC GTGCATGGGT GAAGCAGAAG ATCGCGGAAG GCCGCGTGCC GCGGGGCCAC
AAGATCGGCC TGACCTCGCG CGCCATGCAG CAGTCCAGCC AGATCGACGA GCCCGACTAC
GGCACCCTGC TCGACGACAT GTTCTTCGAG CAGGGCGGCG ACATTCCGTT CAAGCGCTTC
ATCGCGCCGC GCATCGAGGT GGAGCTGGCC TTCGTGCTCG GCAGGAAGCT GCAGGGCCCG
AACGTCACGA TCTTCGACGT GCTGGCCGCC ACCGACTATG TGGTGCCGGC CATCGAGATC
ATCGATGCGC GCATCGAGCA GTTCGACCGC CACACCAAGG CGCCGCGCAA GGTGTTCGAC
ACCATTGCCG ACAACGCGGC CAACGCCGGC ATCGTGATGG GCGGACGGCC GGTCAAGCCC
GACGCGGTCG ACCTGCGCTG GGTGAGCGCG CTGCTCTACA AGAACGGCGT GATCGAAGAA
TCGGGCGTGG CCGCGGCCGT GCTCAACCAC CCGGCCACGG GCGTGGCCTG GCTCGCGAAC
AAGCTCGCGC CGTGGGACGA ATGCCTCGAA GCCGGCGAAG TGGTGCTCGG CGGCTCGTTC
ACGCGGCCGA CCACCGCCCT GCCCGGCGAC ACCTTCCATG CCGACTACGG CCCTCTGGGC
AGCATTGCCT TTCGTCTCAT CTAA
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| Protein sequence | MLTADTIASL AAELHESEKS RVQVEHFSKR FPEMTIEDGY AISRAWVKQK IAEGRVPRGH
KIGLTSRAMQ QSSQIDEPDY GTLLDDMFFE QGGDIPFKRF IAPRIEVELA FVLGRKLQGP
NVTIFDVLAA TDYVVPAIEI IDARIEQFDR HTKAPRKVFD TIADNAANAG IVMGGRPVKP
DAVDLRWVSA LLYKNGVIEE SGVAAAVLNH PATGVAWLAN KLAPWDECLE AGEVVLGGSF
TRPTTALPGD TFHADYGPLG SIAFRLI
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