| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0235 |
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| Symbol | |
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| ID | 7971444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 251832 |
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| End bp | 252629 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790838 |
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| Product | aldolase II superfamily protein |
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| Protein accession | YP_002942164 |
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| Protein GI | 239813254 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA CACTCGCCAC CCGCGTGCCG CCATCGGCTC CGGTCCATCC CTCGATCCAT
CCGGACGAAC GCGCCGCGCG CGAGCAGCTT GCGGCCTGCT ACCGCGTGTT TGCGATGCTG
GGCTGGACCG AGATGATCTA CAACCACATC ACGGTGCGGC TGCCCGACAG CGTGACGGGC
GGGGAGAAGC AGTTCCTCAT CAACCCCTTC GGCCTGCACT ACAGCGAAGT GACGGCCAGC
AACCTGGTGA AGATCGACCT GCAGGGCAAG GTGCTCGACG GCTCGGCCTG GCCGGTGAAT
CCGGCCGGCT TCACGGTGCA CGCCGCCATC CACGACGGCC TGCCCGGCGC GCACTGCGTG
ATGCACACGC ACACCACGGC CGGCGTGGCC GTGGCCTGCC TGCAGGGCGG CCTGCAGCAG
ACCAATTTCT ATACCGCGCA GTTGCACGGC ATGGTGGCCT ACCACGACTT CGAGGGCATC
ACCATCCATG CCGACGAGGG CCCGCGCCTG CTCAGGAGCA TCGGCGACCG CAACGCCGTG
ATCCTGCGCA ACCACGGCCT GCTGGCCTGG GGGCAGACGC TGCCGCAGAC CTTCGCCATC
CTCTGGACGC TGCAGCGCGC CTGCGAGATC CAGATGGCCA CCTTCTCGAT GGGGGCGGCC
ATTCCCGTGA GCGAGGAGAT CGCGCAGCGC TGCACGCGCG ACGCGCTGCA GTTCAGCCCC
GAGCATGGCG CGGGGCAGGA CGTGTTCGAT GCGCTGGTGC GCCAGGTCGA CCGCATCGAC
GCCAGCTACA AGAACTGA
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| Protein sequence | MNTTLATRVP PSAPVHPSIH PDERAAREQL AACYRVFAML GWTEMIYNHI TVRLPDSVTG
GEKQFLINPF GLHYSEVTAS NLVKIDLQGK VLDGSAWPVN PAGFTVHAAI HDGLPGAHCV
MHTHTTAGVA VACLQGGLQQ TNFYTAQLHG MVAYHDFEGI TIHADEGPRL LRSIGDRNAV
ILRNHGLLAW GQTLPQTFAI LWTLQRACEI QMATFSMGAA IPVSEEIAQR CTRDALQFSP
EHGAGQDVFD ALVRQVDRID ASYKN
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