Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0232 |
Symbol | |
ID | 7971441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 248998 |
End bp | 249954 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644790835 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_002942161 |
Protein GI | 239813251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAA AGCAGGTGCT CGGCACCGCC TCCGGTGCAT GGGGCGAGAG GAGGTGGGCC GGCGTCGGCG CCGCCGAGGT CATGCTGCTG GCTGTGGCGG CGGTGTGGGG CGGCAGCTAC GCGGTGGCCA AGCAGGCCAC GCAGCAGCTG CCCGTGCTGG AGTTCATTGC GCTGCGCTTC GGGCTGACAT TCGTCGTGCT GCTGCCGGCG CTCAGGCCGC TGTTCGATGC GCAATGGCGG CAAGGCCTCG CGGTGGGCGG CCTGCTCGGC GCCAACCTGC TGGCGATCTT CGTCTGCGAG ACCTTCGGTG TGTCGCTCAC TGCGGCGAGC AACGCCGCAT TCCTGATCAG CCTGTGCGTG GCGCTCACGC CCTTTGTCGA ATGGTGGCTG CTCGGGCGGC GGCCGGAGCC GCGCATGTTC TGGGCGGCGG GCCTGTCGGC GGTGGGCGCC GCGATGCTGT CGGCCACTTC GCCCGCCAGC ATCTCGGTGG GATGGGGCGA TGGCCTGATG GTGATTGCGG CCTTCCTGCG CGCCGTGATG GTGTGCATGA CGCGGCGGTT CGCTGGCCGC CATTCGATGC CGGCGCTGAC GCTGACCGCC GTGCAGTCGG GCATGATGGC GCTCGGCGCG ATGGCGCTGT CGCTCGTCGC GTCGAAGGGC GCATGGCACA TGCCGCCCGC CACGGCCTCC TTCTGGTGGG GCATGGCGTA CCTCGTGCTC CTGTGTACGG TTTTCGCGTT CTTCGCGCAG AACCATGCGG CTTCGCATTC GAGTCCGAGC CGGGTGTCGC TGCTGATGGG AAGCGAGCCG GTGTTCGGGG CCTTGATCGC GGTGTACGGG TTCGGGGAGA CGGTCGGGGC CTGGGGCTGG GCCGGTGGAT TGCTGATCGT GATGGCGGCT TGGTGGGTGA CGATGCCGCA GTCCACCGCG CCGCGTGCGC ATTCCGTGAA TTTGTAG
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Protein sequence | MDSKQVLGTA SGAWGERRWA GVGAAEVMLL AVAAVWGGSY AVAKQATQQL PVLEFIALRF GLTFVVLLPA LRPLFDAQWR QGLAVGGLLG ANLLAIFVCE TFGVSLTAAS NAAFLISLCV ALTPFVEWWL LGRRPEPRMF WAAGLSAVGA AMLSATSPAS ISVGWGDGLM VIAAFLRAVM VCMTRRFAGR HSMPALTLTA VQSGMMALGA MALSLVASKG AWHMPPATAS FWWGMAYLVL LCTVFAFFAQ NHAASHSSPS RVSLLMGSEP VFGALIAVYG FGETVGAWGW AGGLLIVMAA WWVTMPQSTA PRAHSVNL
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