| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0231 |
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| Symbol | |
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| ID | 7971440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 247971 |
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| End bp | 248867 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790834 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942160 |
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| Protein GI | 239813250 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACCT TTCTTCGGGT CGCCGAGCTG GGCAGCTTCT CTGCGGCCGC CGATCTGCTG
GGCATGACGC CTTCGGCCGC GAGCCGGCAG GTGAAGCGCC TGGAAAAGGA GATCGGCGCG
CAGCTGATCC AGCGCACGAC GCGCCAGCTG CGGCTGACCG AGCCCGGCGT CGAGGCCCTC
GCACGGTGCC GCGAATTGGT GCTTGCGGCC CAAGGCGCGA TGGACGTCGC GCAACGGTTC
TCGAAGAAGC CGAGCGGGCT GGTGCGCATC AGCGCGCCGA AGGCCTTCGC GCGGCGCGTG
CTGCATCCGC ATATCCTCGA CTTCCTGCAG CGCCATCCCG AGGTCGACGT GCAGCTCATC
GTGGAAGACC GCGACATCGA TCCGATCCGC GAAGGCGTGG ACCTGGTGGT GCGGCTGACG
ACGAAACCGC CCGAAGGGCT GGTGGCGCGG CAGTTGATGC CGGTCGCGCA CATCCTGTGT
GCCTCGCCGC GCTACCTGGC GCAAGGCGCC GCCATCGCGC ACCCTCGCGA TCTCCTCGCG
CACAGCTGCC TCTCGCTCGG CGAGCACGAG CGGGACAACC ATTGGTGCTT CAGGAAGGGC
GATGAAGACG AAGCCGAGGT GGTGGTGCGG GGCCGCTACG TCTCCAACCA CAGCGAGGTG
CGGCTCGAAG CCGCACTGGC GGGGCTGGGC GTGGCGTGCG TGCCGGCCTT CATGGCGCAG
CAGGCGCTGA AAGACGGAAG CGTGATGCGG GTGCTGGCCG ACTGGGAGTT CCAGGGCAAC
TACCACGGGC ACGCCTATAT CCTCTATCCG CCCAGCCGCT TCACCGTGCC CAAGTGCCGG
GTGCTGATCG ACCATCTGCT GGACGCGCTC GCCACGCAGC GCGGCCGGCG GAAATAG
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| Protein sequence | MVTFLRVAEL GSFSAAADLL GMTPSAASRQ VKRLEKEIGA QLIQRTTRQL RLTEPGVEAL
ARCRELVLAA QGAMDVAQRF SKKPSGLVRI SAPKAFARRV LHPHILDFLQ RHPEVDVQLI
VEDRDIDPIR EGVDLVVRLT TKPPEGLVAR QLMPVAHILC ASPRYLAQGA AIAHPRDLLA
HSCLSLGEHE RDNHWCFRKG DEDEAEVVVR GRYVSNHSEV RLEAALAGLG VACVPAFMAQ
QALKDGSVMR VLADWEFQGN YHGHAYILYP PSRFTVPKCR VLIDHLLDAL ATQRGRRK
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