| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0229 |
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| Symbol | |
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| ID | 7971438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 246138 |
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| End bp | 247238 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790832 |
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| Product | alanine racemase |
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| Protein accession | YP_002942158 |
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| Protein GI | 239813248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCC CCATTCTCGC CACTGTCCAC ACCGCCGCGC TTCGCCACAA CCTCGACCGG
GCACGGCGTG CCGCGGTCGA TGCCCGCGTC TGGGCCGTGG TCAAGGCCAA TGCCTATGGC
CACGGCATCG AGCGGGTCTA TGAGGGCCTG CGCGGCGCCG ACGGCTTTGC GCTGCTCGAC
CTGGCCGAGG CCGAGCGCGT GCGCGCCCTT GGCTGGCGCG GCCCGGTGCT GCTGCTCGAA
GGCGTGTTCG ACGCGCGCGA CCTGGAGCTG TGCTCGCGGC TCGACCTGTG GCACACGGTG
CACTGCGACG AGCAGATCGA CATGCTCGCG GCCCACAAGA CGCTCAAGCC GCAGCGCGTG
TTCCTCAAGA TGAATTCCGG CATGAACCGC CTGGGCTTCG CCCCCGAGCG CTTCGGCTCG
GCCTGGACCC GGCTGAACGC GCTGCCCCAG GTCGACGAGA TCTCGCTGAT GACGCATTTC
AGCGACGCCG ACGGCGCACG CGGCATCGCG CACCAGCTCG AAGTGTTCGA GCGCGCCACC
CACGACCTGC TGGGCGAACG CTCCATCGCC AACAGCGCCG CCACCCTGCG CCATGCCCGC
CAGACCCGCG GCGACTGGGT GCGCCCCGGC ATCGTGCTGT ACGGCAGCGC GCCCGACTTT
CCCGAGCACG ACGCGGCGCA CTGGCAGCTG CAGCCCACCA TGACGCTCTC GACCAAACTG
ATCGGGATCC AGACACTGAA GGCGGGCGAC ACCATCGGCT ACGGCTCCAA CTTCACGGCC
GAGGGGCCGC TCACCATCGG CGTGGCCGCG GTCGGCTATG CCGACGGCTA TCCGCGCCAC
TGCAACACCG GCACGCCGGT GCTGGTGAAC GGCGTTCGCA CCCGCATGGT GGGCCGCGTG
AGCATGGACA TGATCACGGT CGACCTCACG CCCGTGCCCG AGGCCAAGTT CGGCACCGAG
GTCACGCTCT GGGGCCGCTC GGCCGTGAGC GGCGCGGTGC TCCCCATCGA CGAGGTCGCG
CAGGCCGCCG GCACCGTCGG CTACGAGCTC ATGTGCGCGG TGGCGCCGCG CGTGCCCTTC
GCGCCGGCCG ACGGCGAATG A
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| Protein sequence | MPRPILATVH TAALRHNLDR ARRAAVDARV WAVVKANAYG HGIERVYEGL RGADGFALLD
LAEAERVRAL GWRGPVLLLE GVFDARDLEL CSRLDLWHTV HCDEQIDMLA AHKTLKPQRV
FLKMNSGMNR LGFAPERFGS AWTRLNALPQ VDEISLMTHF SDADGARGIA HQLEVFERAT
HDLLGERSIA NSAATLRHAR QTRGDWVRPG IVLYGSAPDF PEHDAAHWQL QPTMTLSTKL
IGIQTLKAGD TIGYGSNFTA EGPLTIGVAA VGYADGYPRH CNTGTPVLVN GVRTRMVGRV
SMDMITVDLT PVPEAKFGTE VTLWGRSAVS GAVLPIDEVA QAAGTVGYEL MCAVAPRVPF
APADGE
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