| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0228 |
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| Symbol | |
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| ID | 7971437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 244661 |
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| End bp | 245965 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790831 |
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| Product | lysophospholipid transporter LplT |
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| Protein accession | YP_002942157 |
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| Protein GI | 239813247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.582163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCG GTTTCTACAC GATCATGTCG GCCCAGTTCT TTTCGTCGCT GGCCGACAAC
GCGATCTTTG TCGTGGCGGT CGAGCTCATG CGAAGCACGG GAGCGGCCGA ATGGCAGCGC
GCGGCGCTGG TGCCGATCTT TGCCGTCTTC TACGTGGTGC TGGCGCCGCT GGTGGGCGCC
TTTGCCGACG CCTTGCCCAA GGGGCGGGTG ATGTTCATCA GCAACGCGAT CAAGGTGGTC
GGCTGCCTGA TGATGCTGTT CGGCTCGCAT CCGCTGCTGT CGTATTCGAT CGTGGGGCTG
GGCGCCGCGG CCTATTCGCC GGCCAAGTAC GGCATCCTGA CCGAGCTCCT GCCCGCTTCG
CAGCTGGTCA AGGCCAACGG CTGGATCGAA GGGCTCACCA TCGCCTCGAT CCTGCTGGGC
ATCGTGCTCG GCGGCTCGCT GGTGGGGCAT GCGGTTTCCA GCCGGCTGCT GTCCTTCGAC
ATGCCGCTGA TCGACACGGG GGTCGATTCG CCGGCCGAGG CGGCCATCTC GGTGCTGATC
TTCGTCTACA TGCTGGCGGC CTGGTTCAAC ACGCGCATTC CGCACACCGG CGTCGAGATG
CGGCCGCTGC GCGCCAATCC GGCGCACGGC CTGGCGCGCA ACATGTTCTC GCTGCTGCCC
GACTTCTGGC ACTGCAACGC ACGCCTGTGG CGCGACAAGC TGGGCCAGAT CTCGCTGGCC
ACCACCACGC TGTTCTGGGG CGCGGGCGCC AATCTCAAGT ACATCGTGCT GGCCTGGGCC
GCGCTCGCGC TCGACTACAA CACCACGCAG GCCACCGCGC TCACCGGCGT GGTCACCATC
GGCATGGCGG TGGGCGCCAT CGTGGCGTCG ATGCGCATGC GGCTGGACAT GGCCACGCGC
GTGATTCCCA TGGGCATTGC CATGGGGCTG CTGGTCATCA GCATGAACCT GATCGGCAAC
GTCTGGATCG CGGTGCCCTT TCTGATCCTG CTGGGCGGGC TGGGCGGCTT CCTGGTGGTG
CCGATGAACG CGCTGCTGCA GCACCGCGGC CACAACCTCA TGGGCGCGGG CCGCTCGATT
GCCGTGCAGA ACTTCAACGA GCAGGCCTGC ATCCTGCTGC TCGGCGGCTT CTACAGCGCC
TGCACCGGCC TGGGCCTGTC GGCCTTTGCG GCCATCGGCG CCTTCGGCGG CGTGGTGGCG
GGCTGCATGT GGCTGATCCA GCGCTGGCAT CATCACAACC TGCGCAAGTA CCCCGAAGAA
GTCGAGCACC TGCTCGCCAT CGCCCGCAGC GACAAGCATC ATTGA
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| Protein sequence | MKRGFYTIMS AQFFSSLADN AIFVVAVELM RSTGAAEWQR AALVPIFAVF YVVLAPLVGA
FADALPKGRV MFISNAIKVV GCLMMLFGSH PLLSYSIVGL GAAAYSPAKY GILTELLPAS
QLVKANGWIE GLTIASILLG IVLGGSLVGH AVSSRLLSFD MPLIDTGVDS PAEAAISVLI
FVYMLAAWFN TRIPHTGVEM RPLRANPAHG LARNMFSLLP DFWHCNARLW RDKLGQISLA
TTTLFWGAGA NLKYIVLAWA ALALDYNTTQ ATALTGVVTI GMAVGAIVAS MRMRLDMATR
VIPMGIAMGL LVISMNLIGN VWIAVPFLIL LGGLGGFLVV PMNALLQHRG HNLMGAGRSI
AVQNFNEQAC ILLLGGFYSA CTGLGLSAFA AIGAFGGVVA GCMWLIQRWH HHNLRKYPEE
VEHLLAIARS DKHH
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