| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0224 |
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| Symbol | glcF |
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| ID | 7971433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 241381 |
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| End bp | 242613 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790827 |
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| Product | glycolate oxidase iron-sulfur subunit |
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| Protein accession | YP_002942153 |
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| Protein GI | 239813243 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCG AACTCGCCCC CGAATTCCGC GGCACCGACG AAGGCCGCGA GGCCGAAGCC
ATCCTGCGCA AGTGCGTGCA CTGCGGCTTC TGCACCGCCA CTTGCCCCAC CTACCAGCTG
CTCGGCGACG AGCTCGACGG CCCGCGCGGA CGCATCTACT TGATCAAGCA GGTGCTCGAA
GGCAAGGCCC CCACGCGCAG CACGCAGCTG CACCTGGACC GCTGCCTGAC CTGCCGCAAC
TGCGAGAGCA CCTGCCCGAG CGGCGTGCAG TATGGCCACC TGGTCGATAT CGGCCGCAAG
ATCGTCGACG AGAAGGTGCC GCGCCCCGCC ATGGAGTCGG CCACGCGCTG GCTGTTGAAG
GAAGGACTGC CGTCGCCGCT GTTCGGCCCG GCGATGAAGC TCGGCCAGTC GGTGCGCGGC
CTGCTGCCCG ATTCGCTCAA GGCCAAGGTG CCGGCCAGGC AGGAGGCCGG CGCCTGGCCC
ACCGCCACGC ATGCGCGCAA GGTGATGATG CTCGCGGGCT GCGTGCAGCC GTCGATGATG
CCCAACATCA ACAGCGCCAC CGCGCGCGTG CTCGATGCGG CCGGCATCCA GGCCGTGGTC
GCGCCCGAGG CCGGCTGCTG CGGCGCCGTC AGGTTCCACC TCAACGACCA GGAGGGCGGC
AAGGCCCAGA TGCGCGCCAA CATCGACGCC TGGTGGCCGA TGGTCGAACG CAACGAGGTC
GAAGCCATCG TCATGAACGC CTCGGGCTGC GGCGTCACGG TGCGCGAGTA CGGCCACATC
CTGCAGCACG ACCCGGCCTA CGCCGCCAAG GCCGCGCGCA TCAGCGAGCT GACGCGCGAT
TTGAGCGAGC TGCTGCCCGA CCTGGTGCCG GTCCTGAAGG CCCGCGTGCA TGCGCCGCAG
GGCGTGGCCG CCTACCACCC GCCCTGCACG CTGCAGCACG GCCAGAAGCT GCGCGGCGGC
GTCGAAACGC ATCTGCGCGC ACTCGGCTTC GACGTGCGCG TGGCCATGAA CGAATCGCAC
CTGTGCTGCG GCTCGGCCGG CACCTACTCG GTGCTGCAGC CGGAGCTGGC CTACCCGCTG
CGCGACCGCA AGCTCGGGCA CCTGGCGCAG CTGCAGCCGA GCGTCATCGC CTCGGCCAAC
ATCGGCTGCA TCACGCACCT GCAAAGCGGC AGCCAGCAGA CGCCCGTGCG GCACTGGGTG
GAGCTGCTGG ACGCGGCGCT GGCAGCGGCC TGA
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| Protein sequence | MQTELAPEFR GTDEGREAEA ILRKCVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQVLE
GKAPTRSTQL HLDRCLTCRN CESTCPSGVQ YGHLVDIGRK IVDEKVPRPA MESATRWLLK
EGLPSPLFGP AMKLGQSVRG LLPDSLKAKV PARQEAGAWP TATHARKVMM LAGCVQPSMM
PNINSATARV LDAAGIQAVV APEAGCCGAV RFHLNDQEGG KAQMRANIDA WWPMVERNEV
EAIVMNASGC GVTVREYGHI LQHDPAYAAK AARISELTRD LSELLPDLVP VLKARVHAPQ
GVAAYHPPCT LQHGQKLRGG VETHLRALGF DVRVAMNESH LCCGSAGTYS VLQPELAYPL
RDRKLGHLAQ LQPSVIASAN IGCITHLQSG SQQTPVRHWV ELLDAALAAA
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