| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0223 |
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| Symbol | |
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| ID | 7971432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 240251 |
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| End bp | 241357 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790826 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_002942152 |
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| Protein GI | 239813242 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCCG CCCTCCGCCA GATCGCCGAA CGCATTCGCG CCGCGGCCGC CGATGCCACG
CCGCTTCGCA TCCGCGGCGG CGGCACCAAG GATTTCTACG GCGAGGCGTT GCAAGGCGAC
GTTCTCGACA CCACGGCGCT CGCAGGCATC ACGAGCTACG AGCCGAGTGA ACTCGTCGTC
ACCGTGCGCG CCGGCACACC GCTCGCCGAA CTCGAAGCCG CATTGGCCGA GGAGGGGCAG
TGCCTGCCCT TCGAGCCGCC ACACTTCGCC AGCAACAGCA CGGTGGGTGG CATGGTCGCC
GCCGGCTTGA GCGGCCCCGC GCGCGCCAGC GTGGGCGCGG TGCGCGACTA CGTGCTCGGT
GCCACGTTGG TCAACGGCCG TGGCGACATC CTGAGCTTCG GCGGGCAGGT GATGAAGAAC
GTCGCAGGCT ACGACGTCTC GCGCGTACTC GCGGGCTCGC TCGGCACGCT GGGCGTGATT
GCCGAGGTGA GCCTCAAGGT GCTGCCCGTT GCGCCCGCCG AGGCCACGCT GGAATTCGCC
TGCAGCCAGG CCGATGCGCT GCGGCTGCTC AACGAATGGG GCGGCCGGCC GCTGCCGCTC
AATGCGAGCT GCTGGTTCGA ACAGGCGGGC GCCGGCGTCC TCCAGCTGCG CCTGCGCGGC
GCGGTCGCGG CGGTGGAAGC CGCCTGCGCG CATCTCGGCG GCGAGCGCAG GGACAACGCG
CAAGCCGCGG CGCACTGGCA GGCGCTGCGC GACCAGCAGC TGCCGTGGTT CGGCACGGGC
GTGAACGCAC TGTGGCGGCT GTCGGTGCCG CAGACCGCAT CGGCGCTTGC ATGGGATGGC
GATGGCGCCG CGCCGCTGGT CGAATGGCAT GGCGGGCAGC GCTGGTACCA GGCGCCGCCC
GCGCAGGCCG CGCGCATCCG CGAAGCTGCG CATGCGGCCG GCGGGCACGC CACGCTGTTC
CGCATGCCTG CAGGCCAGGC CGCGGACAGC CGCGTGCCGC GCTTCGACGC ATTGAGCGCG
CCCGTAGCCC GCATCCACCA GGCGCTGATG CACGAATTCG ATCCGCACCG CATCTTCGAT
CGCGCACGGC TGCTCGCCGG CGCATAG
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| Protein sequence | MEPALRQIAE RIRAAAADAT PLRIRGGGTK DFYGEALQGD VLDTTALAGI TSYEPSELVV
TVRAGTPLAE LEAALAEEGQ CLPFEPPHFA SNSTVGGMVA AGLSGPARAS VGAVRDYVLG
ATLVNGRGDI LSFGGQVMKN VAGYDVSRVL AGSLGTLGVI AEVSLKVLPV APAEATLEFA
CSQADALRLL NEWGGRPLPL NASCWFEQAG AGVLQLRLRG AVAAVEAACA HLGGERRDNA
QAAAHWQALR DQQLPWFGTG VNALWRLSVP QTASALAWDG DGAAPLVEWH GGQRWYQAPP
AQAARIREAA HAAGGHATLF RMPAGQAADS RVPRFDALSA PVARIHQALM HEFDPHRIFD
RARLLAGA
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