| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0222 |
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| Symbol | |
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| ID | 7971431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 238713 |
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| End bp | 240221 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790825 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_002942151 |
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| Protein GI | 239813241 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGC CGCTCACCGC CGCCCAGCAC GATTCGCTGC TGCAAAAAAA AACCGACCGC
CAGTCGCAGA TCGTGCGCGC CCTGCAGGCC CACCTGCCGG CCCACGCGCT GATCTGGCAC
GCCGAGGACA CCACGCCCTA CGAGTGCGAC GGCCTCACCG CCTACCGCCA GCGCCCGCTG
GTGGTGGCCC TGCCCGAGAC CGAGGCGCAG GTGGCGGCCG TGCTCAAGAC CTGCCACCCG
CTCGGCGTGC CCGTGGTGGC GCGCGGTGCG GGCACCGGGC TTTCGGGCGG CGCCATGCCG
CATGCGCTGG GCGTGACGCT GTCGCTCGCC AAGTTCAACC GCATCCTGAA GATCGATCCG
GTGAGCCGAA CGGCCGTGGT GCAGTGCGGC GTGCGCAACC TCGCCATCAG CGAAGCCGCC
GCGCCCTTCA ACCTCTACTA CGCGCCTGAT CCGTCGAGCC AGATCGCCTG CACCATCGGC
GGCAACGTGG CCGAGAACTC GGGCGGCGTG CACTGCCTCA AGTACGGTCT CACCTTGCAT
AACGTGCTGC GCGTGCGCGG CTTCACGGCC GAAGGCGAGC CCATCGAATT CGGCGGCGAG
GCGCTCGACG CGCCGGGCCT GGACCTGCTC GCGCTGGTCA TCGGCAGCGA AGGCATGCTG
GCCGTGACCA CCGAGGTCAC CGTCAAGCTG GTGCCCAAGC CGCAGGTCGC GCGCTGCATC
ATGGCCAGCT TCGACGACGT TCGCAAGGCC GGCGATGCGG TGGCCGCGGT GATTGCGGCC
GGCATCATTC CCGCGGGGCT CGAGATGATG GACAAGCCCA TGACCGCCGC CGTTGAAGAC
TTCGTGCACG CGGGCTACGA CCTCGACGCG GCCGCGATTT TGCTGTGCGA ATCCGACGGC
ACCGCCGAGG AAGTGGAAGA AGAAATCGGC CGCATGACGG CCGTGCTGCG CTCCTGCGGC
GCCACCGCCA TTGCGGTGAG CAGCAGCGAG GAAGAGCGCA TGAAGTTCTG GAGCGGCCGC
AAGAACGCCT TCCCCGCATC GGGCCGCATC AGCCCCGACT ACATGTGCCT CGACTCCACC
ATTCCGCGCA AGCGCCTGGC CGACATCCTG CTGGCCATCC AGCAGATGGA GAAGAAGTAC
GGCCTGCGCT GCTGCAACGT GTTCCACGCG GGCGACGGCA ACCTGCATCC GCTGGTGCTC
TTCGACGCCA ACGACCCCGA CGAGCTGCAC CGCTGCGAAC TCTTCGGCGC CGACATCCTC
GAGACCAGCG TGGCCATGGG CGGCACCGTG TCGGGCGAGC ATGGCGTGGG CGTGGAAAAG
CTCAACAGCA TGTGCGTGCA GTTCACCGCG GCGGAGAACG AGCAGATGTT CGGCGTCAAG
CGCGCCTTCG ATCCGGCCGG CCTGCTGAAC CCCGGCAAGG TGATCCCCAC GCTGCAGCGC
TGCGCCGAAT ACGGCAAGCA GGTGGTGCGC GGCGGCCGGC TGCCGCATCC CGAGCTGCCG
CGCTTCTGA
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| Protein sequence | MNAPLTAAQH DSLLQKKTDR QSQIVRALQA HLPAHALIWH AEDTTPYECD GLTAYRQRPL
VVALPETEAQ VAAVLKTCHP LGVPVVARGA GTGLSGGAMP HALGVTLSLA KFNRILKIDP
VSRTAVVQCG VRNLAISEAA APFNLYYAPD PSSQIACTIG GNVAENSGGV HCLKYGLTLH
NVLRVRGFTA EGEPIEFGGE ALDAPGLDLL ALVIGSEGML AVTTEVTVKL VPKPQVARCI
MASFDDVRKA GDAVAAVIAA GIIPAGLEMM DKPMTAAVED FVHAGYDLDA AAILLCESDG
TAEEVEEEIG RMTAVLRSCG ATAIAVSSSE EERMKFWSGR KNAFPASGRI SPDYMCLDST
IPRKRLADIL LAIQQMEKKY GLRCCNVFHA GDGNLHPLVL FDANDPDELH RCELFGADIL
ETSVAMGGTV SGEHGVGVEK LNSMCVQFTA AENEQMFGVK RAFDPAGLLN PGKVIPTLQR
CAEYGKQVVR GGRLPHPELP RF
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