| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0220 |
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| Symbol | |
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| ID | 7971429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 236419 |
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| End bp | 237354 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790823 |
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| Product | SMP-30/Gluconolaconase/LRE domain protein |
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| Protein accession | YP_002942149 |
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| Protein GI | 239813239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGACCT CCATCGACAA CAGCCTCTGC GAGCTCGGCG AATCGCCGTT CTGGCATCCG
CGGGAACGCG CCCTGTACTG GCTCGACATC CCGGGCCGTG CGGTGCTGCG CACGCGCGGC
GACATCGGCA CGGACTCGGC CAAGGTGGAG CGCTGGGCCT TGTCCACCGA GCCAGGCTGC
ATGGCGCCGG CACGCAATGG CGGCCTCGTG ATCGCGCTGC GCGACGGCAT CTACCGGGCG
CGCGAGTGGG GCGGTGAACT CGTCGCGATC GCGCGCGTGG ATCACGACGT GCGCACCATG
CGCTTCAACG ACGGCAAGTG CGACGCGCTC GGCCGCTTCT GGAGCGGTTC GATCAACGAG
GCCAAGGACC GCGCCAACGC CGCGCTCTAT TGCCTCGATG CGCGTCCCGG CAGCGGCGTG
GCGCCAGCCC TCACGCAGAT GGCCAACCAG GTGACCACGG CCAACGGGCT CGCGTTTTCG
CCCGATGCGC GCACCTTGTA CTGGGCCGAT ACGCCCGCGC ACCAGGTGCG CGCCTGGAAC
TGGGACGCGG CGGCCAATAC GCTTTCGCAG CCCCGCGTGT TCCACCAGTT CGACGCCAAG
CCCGAAGGCT GGACCCCCGA TTCGCTGGCG CTGCGCTACG AAGGCCGCCC CGATGGCGCC
ACGGTCGATG CACAGGGCCA CTACTGGGTC GCGATGTTCG AAGGCGCGCA GCTGCTGCGC
CTTGCGCCTT CGGGCGAGAT CGTGGCCGCC GTTCCTGTGC CGGCCCAGTG CCCCACCATG
CCCTGCTTCG GCGGCGACGA CCTGAAGACG CTCTTCGTCA CCACCGCCCG CAAGGGCCGC
CCCGCCGCCG AGATCGAGCG GCTGCCGGCG TCGGGCACGG TGATCTCGAT GCGGGTCGAT
ACGCCGGGGT TGCCCGTCAG CTTCTTCGAG AACTAG
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| Protein sequence | MWTSIDNSLC ELGESPFWHP RERALYWLDI PGRAVLRTRG DIGTDSAKVE RWALSTEPGC
MAPARNGGLV IALRDGIYRA REWGGELVAI ARVDHDVRTM RFNDGKCDAL GRFWSGSINE
AKDRANAALY CLDARPGSGV APALTQMANQ VTTANGLAFS PDARTLYWAD TPAHQVRAWN
WDAAANTLSQ PRVFHQFDAK PEGWTPDSLA LRYEGRPDGA TVDAQGHYWV AMFEGAQLLR
LAPSGEIVAA VPVPAQCPTM PCFGGDDLKT LFVTTARKGR PAAEIERLPA SGTVISMRVD
TPGLPVSFFE N
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