| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0219 |
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| Symbol | |
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| ID | 7971428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 234849 |
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| End bp | 236147 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790822 |
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| Product | ammonium transporter |
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| Protein accession | YP_002942148 |
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| Protein GI | 239813238 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTGT CCACGCTGCT CGTCATCATG ATGACGGTTC CCGGCCTGGC GCTGTTCTAC
GGCGGCCTGG TGCGCAGCAA GAACATGCTG TCGGTGCTGA TGCAGGTGAT GGTCACCTTC
TCGATGATCG TGGTGCTGTG GCTCATCTAT GGCTACAGCC TCGCGTTCAC CGAGGGGAAC
GCTTTCTTCG GCGGATTCGA CCGGCTCTTC ATGAAGGGGA TCTTCGATCC GGCCACCGGC
GTGTTCGCAC CCGGCGCCAC CTTCAGCAAG GGCGTCTACA TCCCCGAGCT GCTGTTCGCC
GCCTTCCAGG CCACCTTCGC CGGCATCACC TGCTGCCTGA TCGTGGGTGC CTTCGCGGAA
CGCGCCAAGT TCTCGGCCGT GCTGCTGTTC ATGGTGATCT GGTTCACCTT CAGCTATGCG
CCGCTCGCGC ACATGGTCTG GTTCTGGATG GGCCCGGACG CCTACACCGC CGCCAACGTG
GTGGACGCAC AGAACGCCAA GGCCGGCCTG ATCTGGCAGT GGGGCGCGCT CGACTTCGCG
GGCGGCACCG TGGTGCACAT CAACGCCGCC GTGGCGGGCC TGGTGGGCGC CTTCGTGATC
GGCAAGCGCG TGGGCTACGG CAAGGAAGCC TTCACGCCGC ACTCGCTCAC GCTCACCATG
GTCGGCGCTT CGCTGCTGTG GGTCGGCTGG TTCGGCTTCA ACGCCGGCTC GGCCCTGGAA
GCCGGCACCA GCGCCGTGCT CGCCTTCATG AACACCTTCA CCGCCACGGC CGCCGCCGTG
CTCGCATGGT GCATCGGTGA AGCGCTGATG CGCGGCAAGG CCTCGATGCT GGGCGCTGCT
TCGGGCGCCG TGGCAGGCCT GGTGGCCATC ACCCCGGCCG CCGGCAACGT CGGCCTGATG
GGCGCGATCA TCATCGGCTT CATCGCCGGC TTCGCCTGCC TCTGGGGCGT CAACGGCCTC
AAGAAGCTGC TCGGCGCGGA CGACTCTCTC GACGTGTTCG GCGTGCACGG TGTCGGCGGT
ATCGTCGGCG CGCTGCTCAC CGGCGTGTTC AACACCCAGG CCCTGGGCGG CCCCGGCCTC
GTGGGCGACT GGGTCACGGC CAGCGTGGTG TCCAACGGCA TCGGCGCGCA AGTGTGGATC
CAGCTCAAGG GCGTGCTGCT GACCATCGTC TGGTCGGGCG TGGTCTCGTT CATTGCCTAC
AAGATCGCCG ACCTCACCAT CGGCCTGCGT GTGTCGGAAG AAGAAGAGCG CGAAGGCCTC
GACATCTCCT CGCACGGCGA GACCGCATAT AACAGGTAA
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| Protein sequence | MMLSTLLVIM MTVPGLALFY GGLVRSKNML SVLMQVMVTF SMIVVLWLIY GYSLAFTEGN
AFFGGFDRLF MKGIFDPATG VFAPGATFSK GVYIPELLFA AFQATFAGIT CCLIVGAFAE
RAKFSAVLLF MVIWFTFSYA PLAHMVWFWM GPDAYTAANV VDAQNAKAGL IWQWGALDFA
GGTVVHINAA VAGLVGAFVI GKRVGYGKEA FTPHSLTLTM VGASLLWVGW FGFNAGSALE
AGTSAVLAFM NTFTATAAAV LAWCIGEALM RGKASMLGAA SGAVAGLVAI TPAAGNVGLM
GAIIIGFIAG FACLWGVNGL KKLLGADDSL DVFGVHGVGG IVGALLTGVF NTQALGGPGL
VGDWVTASVV SNGIGAQVWI QLKGVLLTIV WSGVVSFIAY KIADLTIGLR VSEEEEREGL
DISSHGETAY NR
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