| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0217 |
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| Symbol | |
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| ID | 7971426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 233359 |
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| End bp | 234183 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644790820 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942146 |
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| Protein GI | 239813236 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.207419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCACC GTAAATTCGC CCAGGCAATG GCCGTGGCCG CCCTTGCTGC CCTGCCGATG
CTTGCGAGCG CACAGCTCAC GGGGAATGTG GCACTGACCA GCAACTACAA GTTCCGCGGC
CAGGACCAGG ACATGATCGG GAAGAACGAC TACGCCAAGA CCAAGGGCTT CAAGCCCGCG
ATCCAGGGCG GCTTCGACTA CGCCTTCGGC GAGACCGGCT TCTATGTGGG CAACTGGAAC
TCCAGCGTCA ACTGGCTCAA GGGCAACAGC ATCGAGAGCG ACATCTACGG CGGCTACAAG
TTCAAGGCCG GCCCCTTCGA CATGGACGTG GGCGCGCTGA CCTACATCTA CCCGGGCAAC
TCCGCCGGCA ACACCACCGA GCTGTACGGC GCCGGCACCT GGGCCGACGA GGCCATCGGC
TCGTTCACGC TGAAGTATTC GCACACGGTG TCGAAGGACT ACTTCGGCTA CGCGGGCAAC
AAGGCCGGCT CGGGCCTGAA GGGCACCAAC ACCGGCTACC TGAACCTGGC CTACAGCAAG
GAGATCGTGC CCAAGCTCAC GCTGAAGGCC GCCGTGGGCT ACACCCACAT GTCCAGCGAC
ATCCGCAGCC TGGGCTACAA GAGCTACGTC GACTACAACG TGGGCGTGTC GTACGACTTC
GGCAGCGGCC TCGCACTGGC CGGCTCGATC CAGGGCGCCA ACAAGAAGAG CTCGTACCTG
GCCGTGTCCA ACCCGGGCGT CGACCTCGGC TTCGGCACCT TCGGCCAGAC CACCTATTCG
CCCAACAAGG CGCGCTTCAT CGTTACGCTC AGCAAGACCC TGTAA
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| Protein sequence | MMHRKFAQAM AVAALAALPM LASAQLTGNV ALTSNYKFRG QDQDMIGKND YAKTKGFKPA
IQGGFDYAFG ETGFYVGNWN SSVNWLKGNS IESDIYGGYK FKAGPFDMDV GALTYIYPGN
SAGNTTELYG AGTWADEAIG SFTLKYSHTV SKDYFGYAGN KAGSGLKGTN TGYLNLAYSK
EIVPKLTLKA AVGYTHMSSD IRSLGYKSYV DYNVGVSYDF GSGLALAGSI QGANKKSSYL
AVSNPGVDLG FGTFGQTTYS PNKARFIVTL SKTL
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