| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0215 |
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| Symbol | |
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| ID | 7971424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 229388 |
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| End bp | 231559 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790818 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_002942144 |
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| Protein GI | 239813234 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.322319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA ACGCCAGCAA TGACAACAGC AACGGCAGCG CCAGCATGCA GGCCGATCCG
CAGGAGCGCC CCCATCCGCT GGACGCGGGC CACCGGCTGG ACGAATTCGA GCTGCTCGAG
GTCATTGGCG AAGGCGGCTT CGGCATCGTC TACCGCGCCT ACGACCATTC GCTGCAGCGC
GAGGTGGCCA TCAAGGAATA CATGCCCTCG ATGCTCGCGC GCCGCGTGGG CGACGACAGC
GTGCACGTGC GTTCCGACCG CCTCACGGCC ACCTTCCAGG CGGGCCTGCG CAGCTTCATC
AACGAGGCGC GCACGCTCGC GCAGTTCAGC CATCCGGCGC TGGTGCGGGT GCACCGCTTC
TGGGAGGCCA ACAGCACCGC CTACATGGCG ATCCAGCTCT ACCGCGGCCG CACGCTGCGC
CGGCTGGCCG AGGAAGAGCC GAAGAAGATC TCCGAGGCCT GGCTGCTGAG CATGCTCGGC
CCGCTGCTCG GCGCGCTCGA GACGCTGCAC CGCAGCCAGT GCTTCCACCG CGACATCGCG
CCCGACAACA TCTTCATCCA GCAGGACGAC CTGCCGGTGC TGCTGGACTT TGGCGCGGCG
CGCAAGTCGA TCGCCGACCT GGTCGACGAA GTGGCGGTGA TGGTGAAGTC CGGCTATTCG
CCGATCGAGC AATACGCCGA CGACAACACG CTGCTGCAGG GCGCATGGAC CGACCTCTAC
GCGCTGGGCG CCGTGCTGTA CCGCGCCGTC ACCGGCCACC CGCCGCCCTC GGCCGTGGTG
CGCAGCGTGC AGGACGCCTA CGTGCCGCTG TCGTCGCTGG GCCGCAGCGA CCTGAGCCCG
GCCTTCTGCG CGGCCGTCGA CCACACGCTG GCCGTGCACA GCAAGGACCG CACGCAGACC
GTGGCCGCAT TCGCGGCCGA ACTGGGGCTT GCCAAGCTGG GCGATACCTA CGTGAGCGGA
CTGGCGGCGC CCATGGCCGT CATCGCGCCA CCGCCGCCTT CGAAGGCCGC GCCCGCGGTG
GCACCGGTGC CGCAGCAAGC GCCGGCTGCC TCGGCGGCAC CCCAGGCATC GGCGCCAGCG
GCGGCCGCAG CAGCGCAAGC CACTGCATCG GCCAGTGCCG TGCGGCCTGG AGCCGCTGCC
TCCGAGCCGG TCGAGCCCAA GCCCAAGCCT CAGCCCGCGT CCAAGGCCGA GCCTCCGTCA
TCCTCGCCCA AGCCCGCCGC ACCGCGCGAG GCTGCGGCAG CGCCGGTACG TCCTCCATCG
GCCGCCGGCA AGCCGCAGCC TCAGCCAGCG CCGACCGGCA AGAAATCGTC GCGGCCGCCG
TGGGGCCTGG TCGGCGTGCT GCTGATTGCG CTGGTGGCCG TGGGCAGCTG GATCGGCCTT
CACTTGACTT CAGGCCGGCA GGAAACATCG ACCGCCATGG TGCCGGTGCC CCCGCCGTCG
GGGCCGATGT CCGCCACCTC GCCGCCGCCT GCCGCCATGC CGCCGGGCGA AGGCGCCGCC
GGCGGCTCAT CATCGGCGCC CGCGGGCGAG AACGTGGCGG CAGCGCCCGG CACGCCGCCT
CCCGCGGCGG CGGCCAGCGC ACCGGCCGGC CCGTTGACGC CGCTGACCAA TGTGCCAGTG
GGCGCGGCGC CGGCAGCTGC ACCGGCCACA CCGGACCCCG CAGCCACGCC CCCGGGCGCA
ACGCCAACGC CCGTGCCGCC GCCGGAGGCC GCCATGGCCA CCGCCGAAGC CGAGGACTGG
AACCTGGCCC AGGCCGAGAA CACGCGCGAA GGCTACGAGG CCTACCTGCG CCGCTACCGG
CGCGGCCCGC ATGCGCGCGA TGCCCGCAAC GCCATCGCCG AGCTGAACCG GCTCGCGCAG
GCCGTGCCCG CGGCACCGGG CACGGCGCCC ACGAATCCGG TACCCACCGT GATCGCCGGC
GGCCCGACCC CGCCGACCGC GCCGCCGGCC GCTCCGCCCG GCATGGGACG CGTGGTGCTC
AACATCCGTC CCTGGGGCCA GGTCTTCGTC GACGGCGCCG AGCGCGGCGT GAGCCCGCCG
CTCAAGTCGC TCTCGCTGCG CCCGGGCATC TACAACATCG AAGTGCGCAA CGGCGACCTC
GACGTCTACC GCCAGCGCGT GACGGTGCAG GACAGCAAGT CCGCGCCTGT GGTGAGCCAC
GAGTTCAAGT AG
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| Protein sequence | MTTNASNDNS NGSASMQADP QERPHPLDAG HRLDEFELLE VIGEGGFGIV YRAYDHSLQR
EVAIKEYMPS MLARRVGDDS VHVRSDRLTA TFQAGLRSFI NEARTLAQFS HPALVRVHRF
WEANSTAYMA IQLYRGRTLR RLAEEEPKKI SEAWLLSMLG PLLGALETLH RSQCFHRDIA
PDNIFIQQDD LPVLLDFGAA RKSIADLVDE VAVMVKSGYS PIEQYADDNT LLQGAWTDLY
ALGAVLYRAV TGHPPPSAVV RSVQDAYVPL SSLGRSDLSP AFCAAVDHTL AVHSKDRTQT
VAAFAAELGL AKLGDTYVSG LAAPMAVIAP PPPSKAAPAV APVPQQAPAA SAAPQASAPA
AAAAAQATAS ASAVRPGAAA SEPVEPKPKP QPASKAEPPS SSPKPAAPRE AAAAPVRPPS
AAGKPQPQPA PTGKKSSRPP WGLVGVLLIA LVAVGSWIGL HLTSGRQETS TAMVPVPPPS
GPMSATSPPP AAMPPGEGAA GGSSSAPAGE NVAAAPGTPP PAAAASAPAG PLTPLTNVPV
GAAPAAAPAT PDPAATPPGA TPTPVPPPEA AMATAEAEDW NLAQAENTRE GYEAYLRRYR
RGPHARDARN AIAELNRLAQ AVPAAPGTAP TNPVPTVIAG GPTPPTAPPA APPGMGRVVL
NIRPWGQVFV DGAERGVSPP LKSLSLRPGI YNIEVRNGDL DVYRQRVTVQ DSKSAPVVSH
EFK
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