Gene Vapar_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0205 
Symbol 
ID7971414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp217178 
End bp217798 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID644790808 
Producthypothetical protein 
Protein accessionYP_002942134 
Protein GI239813224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.99928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAACA CCATCGGCAT CGTCACGGGC GTCTTGCCCG GGGGAATCTA CAGCGTGCAG 
ACCGAACGCC GGCAACTGCT GCGATGCGCA CGGGCAGCGA GCTGCCTGCT GCGCCCGGCC 
GTCGGTGACA CCGTGCTGGT GACGGGGCCC GACGCAACCC GCCTTTACCT GACGGCAGTG 
GCGGAGCAGG CCGACGCAAG CGCGTCGCGC ATCGATGTGG CGGGAGACAT GACGCTCGCT 
TCGGAGCGCG GAGCGGTCAC CGTCGAGAGC TCGACGCACA TCGCGATGCG TGGCGAACAA 
GGCCTGAGCC TGGATGCACC GCACCTCAGA ATCAACGCTG AAGATGCCGA TTGCCGGGTG 
GACCGGCTCC AATATCAGGG ACAGGAGGCG GTGACCACCG TGCTTTCGAT CCGTGTGATC 
GGCAGGGTCT ACGAAGCCGT GATGGACCGT CTCGTGCATC TGAGCAAGAC GGCATTTCGC 
ATGACCGAGG ACGTGGAGCA TTTGCGTGCG GGACGCATCG ACTACGAAGC CGCGGAGACG 
GCGCGTTTGC ATGGCAAGAA CACCGTCGTG ACGGCGAAAG AAATCGTCAA GGTCGATGCC 
AAGCAGATTC ATATGGGCTG A
 
Protein sequence
MVNTIGIVTG VLPGGIYSVQ TERRQLLRCA RAASCLLRPA VGDTVLVTGP DATRLYLTAV 
AEQADASASR IDVAGDMTLA SERGAVTVES STHIAMRGEQ GLSLDAPHLR INAEDADCRV 
DRLQYQGQEA VTTVLSIRVI GRVYEAVMDR LVHLSKTAFR MTEDVEHLRA GRIDYEAAET 
ARLHGKNTVV TAKEIVKVDA KQIHMG