| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0195 |
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| Symbol | |
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| ID | 7971404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 202747 |
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| End bp | 203229 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644790798 |
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| Product | protein of unknown function DUF796 |
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| Protein accession | YP_002942124 |
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| Protein GI | 239813214 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTAG ACATGTTCAT GCGCGTCGAG GGCGCGAACG GCGAATCCAA GGACTCGAAC
CACAAGGACT GGACCGATAT CAAGTCGTTC GCATGGGGAG CAACGCAGCC TGGCAACATG
GTCAGCGGCG GCGGTGGCGG TGTGGGCAAG GCGAGCTTCA ACGACCTGCA GGTGCTCGCG
CGCATCGACA AGGCGGCGCC GTCGGTGATG AAGAACTGCG CGAGCGGCAA GCACCTGAGC
AAGGTGGAAG TGTCGGTGTG CAAGGCCGGG GGCTCGCAGA TCGAATACAC GCGCGTGACG
CTGGAAGAAG TGCTGGTCAC CTCGGTGCAG TACTCGGCCG AGCAGGGCGG CGATGCGGTG
CTGGTGCAGT TCGCCTTCCA GGCGGCCAAG GTCAAGCAGC AGTACTGGGA GCAGACCGAC
AAGGGCGGCA AGGGCGCTGA AACCGTGCTG GCCTGGAACA TCAAGGAAAA CCGGGAAGCC
TGA
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| Protein sequence | MAVDMFMRVE GANGESKDSN HKDWTDIKSF AWGATQPGNM VSGGGGGVGK ASFNDLQVLA
RIDKAAPSVM KNCASGKHLS KVEVSVCKAG GSQIEYTRVT LEEVLVTSVQ YSAEQGGDAV
LVQFAFQAAK VKQQYWEQTD KGGKGAETVL AWNIKENREA
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