Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0185 |
Symbol | |
ID | 7971394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 190082 |
End bp | 190888 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644790788 |
Product | ABC transporter related |
Protein accession | YP_002942114 |
Protein GI | 239813204 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTCC TCAAAGTAGA CAACCTAGGC AAATCCTTCG GCGGCGTCAA AGCCGTCGAC GGCATCAGCT TCGAGCTCGA GGCCGGCGAG TTGCTGGCCC TCATCGGCCC GAACGGCGCC GGCAAGTCCA CCACCTTCAA CATGGTCAAC GGCCAGCTCA AGGCCGACCA GGGTTCGATC GTGTTCGACG GCCATGAGCT CGTGGGCCAG AAGCCGCGCG AGATCTGGCG CAAGGGCGTG GGCCGCACCT TCCAGATCGC CGAGACCTTT GCCTCGCTCA CCGTCGCCGA GAACGTGCAG ATGGCGATGC TCTCGCACGA CGGCAAGCTG TTCTCGATGT GGCGCCGCGC GGCGGACCAC AAGCGCGACG AAGCGCTGGC GCTGCTCGAC CAGGTCGGCA TGAAGGCGCA GGCCGACCGG CCCTGCAGCG AGCTCGCCTA TGGCGACGTC AAGCGCGTCG AGCTCGCGAT CGCGATGGCC AACGCGCCCA AGCTGCTGCT GATGGACGAG CCCACCGCCG GCATGGCGCC GAAGGAGCGC AACTCGCTGA TGGCGCTGAC CAAGGAGCTC GTGGTCCAGC GCGGCCTGGC CGTGCTGTTC ACCGAGCACA GCATGGACGT GGTGTTCGCC TACGCCGACC GCATGATCGT GCTGGCCCGC GGCCGCCTGA TCGCGCAGGG CAAGCCGCTC GAGATCCGCG ACCATCCGAA GGTGCAGGAG GTGTACTTCG GCAGCGGCAA GACCTTCGAG AAGATCGCAG AAAAAGCCGC CGAAGTGAAC GCGGCCGTGG GAGCAGCAAC CGCATGA
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Protein sequence | MTLLKVDNLG KSFGGVKAVD GISFELEAGE LLALIGPNGA GKSTTFNMVN GQLKADQGSI VFDGHELVGQ KPREIWRKGV GRTFQIAETF ASLTVAENVQ MAMLSHDGKL FSMWRRAADH KRDEALALLD QVGMKAQADR PCSELAYGDV KRVELAIAMA NAPKLLLMDE PTAGMAPKER NSLMALTKEL VVQRGLAVLF TEHSMDVVFA YADRMIVLAR GRLIAQGKPL EIRDHPKVQE VYFGSGKTFE KIAEKAAEVN AAVGAATA
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