Gene Vapar_0181 details

Gene Information

• Locus tag: Vapar_0181
• ID: 7971390
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 185535
• End bp: 186119
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644790784
• Product: protein of unknown function DUF1185
• Protein accession: YP_002942110
• Protein GI: 239813200

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.885926
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGCCA ACATCCGCAA GCTCGTCGTC CAGGTGGACG AAACCCGCAA GGAAATGGGT 
CGCGATATTT CGCCGCCCAC GCGCCGCGCC GTCGCCATTG CGGTGATCGA CAACCCCTAC 
GCGGGCCGCT TCAGCGAGAA CCTCGACGAG CTGATCGCCA TCGGCGAAGA GCTTGGCGCG 
CTCTTGGGGC AGAAGGCCGT GAAGGCGCTG GGCATCGAAC CCGGCCAGGC GCAGAGCTAC 
GGCAAGGCCG CCATCGTCGG CGAAAACGGC GAGCTCGAGC ATGCCGCTGC CATCCTGCAT 
CCCAAGCTCG GCGCACCGCT GCGCGTGGCG GTCGAAAAGG GCGCGGCGCT GGTGCCCTCG 
GCCAAGAAGC GCGGCACGCT GGGCACGGCC ATCGACGTGC CGCTCGGCCA CAAGGACGCG 
GCCTTCGTGC GCAGCCACTT CGACGCCGTC GAGGCGCGCG TGTCCGACGC GCCGCGCGCC 
AACGAGATCG TGGTGGCCGT GGCCGTCACC GACAGCGGCC GTCCGCTGCC GCGCATCGGC 
GGGCTGCAGG CCAGCGAGAT CAAGGGCGAG GACGGGCTGC GCTGA 

 

Protein sequence

MTANIRKLVV QVDETRKEMG RDISPPTRRA VAIAVIDNPY AGRFSENLDE LIAIGEELGA 
LLGQKAVKAL GIEPGQAQSY GKAAIVGENG ELEHAAAILH PKLGAPLRVA VEKGAALVPS 
AKKRGTLGTA IDVPLGHKDA AFVRSHFDAV EARVSDAPRA NEIVVAVAVT DSGRPLPRIG 
GLQASEIKGE DGLR