| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0176 |
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| Symbol | |
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| ID | 7971385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 180226 |
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| End bp | 181017 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790779 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_002942105 |
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| Protein GI | 239813195 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.99928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACA GCCGCACCGC CGCCAAGCCC CAGCGCCGCA CCGGCGTGCG CGAGGCCGCG
GCGCAGGCCA CGCGCGACAG CATCCTGAAG TCGGCGACCA AGGTGTTCGC GAAGTACGGC
TACGACGGCG GCAGCGTGGA GAAGATCTCC AAGGCCGCCA AGTCGTACGA CCGCATGATC
TACTACTACT TCGGCAGCAA GGAAGGCCTG TTCATCGCGG TGCTCGAAGG CATCTACAAG
CGCATGGACG ACGCCGAGGC CGCCATTGCG CTGGACGCCT CGCGGCCCGT GGAGGCGCTC
ACCGAAGTGA TCCGCTTCGT GCTCGGCTAC TACCGCAAGA ACCCCGAGTT CGTGACGCTC
CTGAACACCG AGAACCTGCA CAAGGGCCGG CACATCTCGA AGTCGCTGCG GGCGCGCGAA
TACTCGTCGC GGGCGGTGGC GATCATTGCC GAGATCCTGG CCAGCGGCGC GGCCCAGGGC
CTGTTTCGCC GCGACCTGAA CGCGCGCGAC ATCTACCTGC TGATCGCGTC CACCGGCTAC
TTCTACACCT CGAACCGGCA CACGCTCACG GCCTTCCTCG GCGAGCCGCT GGAGTCGCCA
GAGGCGATCA CGCATTGGGA AGACTTCGTG ATCGAGACCG TGCTGCGCAC CGTGCGCGCA
GACGACATCC AGGAACAAGA GAACAACTCC CCACCCCACG ACGAGGAAAA AATGACCCCC
ATCGCTCACG TTCGTTCGCG GCCCCCCAAG GGGGCGCAAG CCTCCCTTGG GGCGGCCCGG
CGGGAGGCTT GA
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| Protein sequence | MADSRTAAKP QRRTGVREAA AQATRDSILK SATKVFAKYG YDGGSVEKIS KAAKSYDRMI
YYYFGSKEGL FIAVLEGIYK RMDDAEAAIA LDASRPVEAL TEVIRFVLGY YRKNPEFVTL
LNTENLHKGR HISKSLRARE YSSRAVAIIA EILASGAAQG LFRRDLNARD IYLLIASTGY
FYTSNRHTLT AFLGEPLESP EAITHWEDFV IETVLRTVRA DDIQEQENNS PPHDEEKMTP
IAHVRSRPPK GAQASLGAAR REA
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