Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0173 |
Symbol | |
ID | 7971382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 177628 |
End bp | 178605 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644790776 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002942102 |
Protein GI | 239813192 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG ACAACCCCTC TGCCGCCGCC CGCGCCCCGA TCCGCATCGC GGCGGTGATC CCCTGCTACA ACGAGGCGCT GTCGATCGCG CAGGTGGTCG CGCAGTTCCG CGCGGCGCTG CCCGAGGCCG AGATTCACGT CTTCGACAAC AACTCGACCG ACGACACGGC CGCCATCGCG CGCGCGAGCG GCGCCACGGT CACGCACGTG GCCGCGCCCG GCAAGGGCAA CGTCGTGCGC CGCATGTTCG CCGACGTCGA AGCCGACGTG TACGTGACGG TCGACGGCGA CGCCACCTAC GACGTGGCCA GCGCGCCGCG GCTGGTGGAC GCGCTGGTGG AGCGCAACCT CGACATGGTG GTGGGCTGCC GAGTCGACGA TGGGCAGAAC GCGCTCACCT ACCGCGCCGG CCACCGCTTC GGCAACCGGC TGCTCACGGG CGCCGTGGCG CAGCTTTTCG GCGGCGGGCT GACCGACATG CTCTCGGGCT ACCGCGTGTT CTCGCGCCGC TACGCCAAGT CGTTCCCGGC GCTCTCGCAG GGCTTCGAGA TCGAGACCGA GCTCACGGTG CACGCGCTCG AGCTGCGCAT GCCCCATGCC GAGTTCGACA CCGCCTACAG CACGCGGCCC GAAGGCTCGC ACAGCAAGCT CTCGACCTAC CGCGACGGCT GGCGCATCCT GAAGACCATC TGCAAGCTGT TCATCAGCGA GCGGCCGCTG CAGTTCTTCT CGATCCTTGC GGCAGTGCTC GCGGCGGGCG CGATCGCGCT GGCCATTCCG CTGCTGCTCA CCTACCTGCA CACCGGCCTG GTGCCCCGGC TCCCCACGGC GGTGCTGGCG ACCGGCGCCA TGCTGGCCGC CATGCTGTCG ATGGTGTGCG GCGTCGTGAT GCACGCGATC CGGCTCGCCC GCCGCGAAGC CAAGCGGCTG CGCTACCTCG CGATACCCGG CGTCGGGCAG TTCCGCCGCA AGCCATGA
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Protein sequence | MTDDNPSAAA RAPIRIAAVI PCYNEALSIA QVVAQFRAAL PEAEIHVFDN NSTDDTAAIA RASGATVTHV AAPGKGNVVR RMFADVEADV YVTVDGDATY DVASAPRLVD ALVERNLDMV VGCRVDDGQN ALTYRAGHRF GNRLLTGAVA QLFGGGLTDM LSGYRVFSRR YAKSFPALSQ GFEIETELTV HALELRMPHA EFDTAYSTRP EGSHSKLSTY RDGWRILKTI CKLFISERPL QFFSILAAVL AAGAIALAIP LLLTYLHTGL VPRLPTAVLA TGAMLAAMLS MVCGVVMHAI RLARREAKRL RYLAIPGVGQ FRRKP
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