| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0165 |
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| Symbol | |
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| ID | 7971374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 167142 |
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| End bp | 168551 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790768 |
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| Product | N-formimino-L-glutamate deiminase |
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| Protein accession | YP_002942094 |
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| Protein GI | 239813184 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGC TGTTCGCGGC CGATGCGCTG CTGCCCGTCG GATGGGCAAA GAACGTGCTG
CTGTCGTGGA ACGAGGCCGG CCAGCTCACG CAGGTGCAGT CCGCGGCCCC GCCGGCAGCG
GGCGCGCAGG TGGCGAAGGG CCCCGTGATC CCCGGCATGC CCAACCTGCA TTCGCATGCC
TTCCAGCGCG CCTTCGCGGG GCTCACCGAA TACCGCGCCC AGCAGCAGGA CAGCTTCTGG
AGTTGGCGCA CGCTGATGTA CCGCTTTGCC GCGCGCCTCG GCCCGCAGCA GATGGAGGCC
ATCGCGACCT GGCTCTATGC CGAGATGCTC GAGGCGGGCT ACACCAGCGT GTGCGAGTTC
CAGTACGTGC ACCACGATGC CGATGGCCGC CCCTATGCCG ACGATGCGAC GCTGAGCCTC
GCGCTGCTGC GCGCCGCGAA GAAGGCCGGC ATCGGTTTCA CGCTCTTGCC CGTGCTCTAC
CAGGCCAGCG GCTTCGGCGG ACTGCCGCCC AACGAGGGCC AGCGCCGCTT CATCCGCTCG
ACCGATTCGA TGCTGCGCCT GCTCGACACC CTCAAGCCCG CATGCGATGC GCAGGGCGCA
CCCGGACCGC AAGGCGGTCC TTCGGCCCGC CTGGGGCTCG CGCCGCATTC GCTGCGCGCC
GTGCCGCCCG ATGCGCTGCG CGAAGCCGTG GCGGGGCTCG AGGCCATCGA CCCGGGCGCG
CCGATCCACA TCCACATCGC CGAACAGACC AAGGAGGTCG ACGACTGCGT CGCCTGGAGC
GGCCAGCGGC CCGTGGCCTG GCTGCTCGAC CATGCGCCGG TCGATGCGCG CTGGTGCCTG
GTGCATGCCA CGCACATGGA CGCGGCCGAA TACGAGCGTG CCGCAAAGAG CGGCGCGGTC
GCCGGCCTGT GCCCGACCAC CGAGGCCAAC CTGGGCGACG GCATCTTCGA TTTTTCCGCC
TGGCGCCACC ACGGCGGCGC CTGGGGCCTG GGCTCCGACA GCCATGCCAC GGTCAATGCC
GCGGAAGAGC TGCTGATGCT CGAATACAGC CAGCGCCTGG CCTGGCGGCA GCGCAACGTC
GGCGCCAGCG CGGCGCAGCC GCATGTGGCC ACCGCGCTCA CGCTCGAAGC GGTGCGCGGC
GGCGCGCAGG CCTCGGGCCG GGCCATCGGC GGCCTGGCCG CGGGGCAGCA GGCCGACTTC
GTCGTGCTCG ATGCCGCGCA GCTTGCGCTG CAGGGCCTGC CGGCGCCCGA CATGCTGTCG
TCGCACGTCT TTGCGAGCCA CCGCACCTCG GCCATCGACA CCGTCTGGGT CGCGGGCCAG
CCGCGCGTGG CGGCCGGCCG CCATGCCCTG CACGCCGAGG CCGCCGCCGC CTTCGTCGCG
GCGCGCAGCC AGCTTCTCCT TGAAAATTAG
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| Protein sequence | MNTLFAADAL LPVGWAKNVL LSWNEAGQLT QVQSAAPPAA GAQVAKGPVI PGMPNLHSHA
FQRAFAGLTE YRAQQQDSFW SWRTLMYRFA ARLGPQQMEA IATWLYAEML EAGYTSVCEF
QYVHHDADGR PYADDATLSL ALLRAAKKAG IGFTLLPVLY QASGFGGLPP NEGQRRFIRS
TDSMLRLLDT LKPACDAQGA PGPQGGPSAR LGLAPHSLRA VPPDALREAV AGLEAIDPGA
PIHIHIAEQT KEVDDCVAWS GQRPVAWLLD HAPVDARWCL VHATHMDAAE YERAAKSGAV
AGLCPTTEAN LGDGIFDFSA WRHHGGAWGL GSDSHATVNA AEELLMLEYS QRLAWRQRNV
GASAAQPHVA TALTLEAVRG GAQASGRAIG GLAAGQQADF VVLDAAQLAL QGLPAPDMLS
SHVFASHRTS AIDTVWVAGQ PRVAAGRHAL HAEAAAAFVA ARSQLLLEN
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