| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0157 |
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| Symbol | |
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| ID | 7971693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 158760 |
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| End bp | 159497 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790760 |
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| Product | transcriptional regulator, histidine utilization repressor, GntR family |
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| Protein accession | YP_002942086 |
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| Protein GI | 239813176 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCG ACCTGCCGTC CCTCGCGCTC TATGCGCAAG TCAAGGATCA CATCTCCCGC
AAGATCCAGG ACGGCACCTG GCCGGCCGGC CATCGCCTGC CGTCCGAGAG CGAATTGGTC
GCGCAGTTCG GCATCTCGCG CATGACGGTG AACCGCGCGC TGCGCGAGCT CATGGAGCAG
GGCCGCATCG TGCGCGTGGC CGGGGTCGGC AGCTTCGTGG CCGAGAACAA GCCGCAGTCC
ACGCTGCTGC AGATCGCCAA CATCGCGAGC GAGATCCGCC AGCGCGGGCA CGACTACCGC
TGCGAGATGC TCGCGGTGGA ACGCCTGGCC GCCTCGCCCG ACGTGGCCGC CTGGCTCGAC
ATGCGCGCGG GCACCTCGGT GTTCCACAGC GTCTGCCTGC ACCTGGAGAA CGACACGCCG
GTGCAGCTGG AGGAGCGCTA CGTCAATCCG CTGGTCGTGC CCGATTTCCT CGAGCAGGAC
TTCGCCGCCG TGCCCCCCAG CGAGTACCTG GTGCGCCACG TGCCCTTCGA CCAGATCGAG
CACGTGGTCG ACGCCGTGCT GCCCACCGCC GAGCAGGCGG CCCGGCTCGC GATGGAGCCC
ACCGACCCCT GCCTGCTGCT CACGCGCCGC ACCTGGACGC GCAACACGCC GGTCACCTGG
GTGCGCTGCC TGCATCCGGC GTCGCGCTAC AGCCTGGGCA GCCGCTTCAA GGCCGACGGC
AACCCCAGCT TCGGCTGA
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| Protein sequence | MKRDLPSLAL YAQVKDHISR KIQDGTWPAG HRLPSESELV AQFGISRMTV NRALRELMEQ
GRIVRVAGVG SFVAENKPQS TLLQIANIAS EIRQRGHDYR CEMLAVERLA ASPDVAAWLD
MRAGTSVFHS VCLHLENDTP VQLEERYVNP LVVPDFLEQD FAAVPPSEYL VRHVPFDQIE
HVVDAVLPTA EQAARLAMEP TDPCLLLTRR TWTRNTPVTW VRCLHPASRY SLGSRFKADG
NPSFG
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