Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0156 |
Symbol | |
ID | 7971692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 157958 |
End bp | 158740 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644790759 |
Product | ABC transporter related |
Protein accession | YP_002942085 |
Protein GI | 239813175 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACC AACTTTCCAT CCAGGGCGTC TCGCGCGTCT TCACCGGCGC CAACGGCCAG CGCACGCAGG CGCTGCTGCC GATCGACTTC GAGGTGCGCG AGAACGACTT CGTCACCATC CTCGGCCCCT CGGGCTGCGG CAAGTCGACG CTGCTGCGCA TCGTCGCGGG GCTCGACTTC CCGACCACCG GCCAGGTGCT GCTCGACGGC GAGCGCATCG AAGGCCCGGG CGCGGACCGC GGCGTGGTGT TCCAGAGCTA CACGCTCTTT CCGTGGCTCA CGGTGGCGCA GAACATCCGC TTCGGCCTGC GCGAGCGCGG CATGAGCGAG GCCGACCAGA AGGAGCGCAG CGAGTTCTTC ATCGCCAAGG TGGGGCTGCG CGGCTTCGAG CACCATTTTC CGAAGCAGCT CTCGGGCGGC ATGCAGCAGC GCACCGCAAT TGCGCGCGCG CTCGCCAACG ACCCCAAGAT GCTGCTGCTG GACGAGCCCT TCGGCGCGCT CGACAACCAG ACCCGCGTGC TGATGCAGGA GCTTTTGCTC GGCATCTGGG AGTCGGCGCG CAAGACGGTG CTGTTCGTCA CGCACGACAT CGACGAGGCG ATCTTCATGG CCAACCGCGT GGCGGTGTTC AGCGCGCGGC CGGGCCGCAT CAAGACCGAG ATCGCGGTCG ACTTTCCGCA TCCGCGCAGC TACACCATCA AGACCTCGCC GGAGTTCATG GAAATCAAGG CGCGGCTGAC CGAAGAGATC CGCGCCGAGT CGATGGCCGC GGCCGAGCAC TGA
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Protein sequence | MNDQLSIQGV SRVFTGANGQ RTQALLPIDF EVRENDFVTI LGPSGCGKST LLRIVAGLDF PTTGQVLLDG ERIEGPGADR GVVFQSYTLF PWLTVAQNIR FGLRERGMSE ADQKERSEFF IAKVGLRGFE HHFPKQLSGG MQQRTAIARA LANDPKMLLL DEPFGALDNQ TRVLMQELLL GIWESARKTV LFVTHDIDEA IFMANRVAVF SARPGRIKTE IAVDFPHPRS YTIKTSPEFM EIKARLTEEI RAESMAAAEH
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