| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0154 |
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| Symbol | |
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| ID | 7971690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 156128 |
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| End bp | 157099 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790757 |
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| Product | extracellular solute-binding protein, family 3 |
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| Protein accession | YP_002942083 |
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| Protein GI | 239813173 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGTCA AGACGGTAGT TGTGAAAGTC GCGTCGCTGC TGGCAGCAGG CGCGTGTGCA
GCAGGCATGG CCCAGACGGC CGCCGCGCAG GAAACCAGGA TTGCGCTCGG CATGTCGGGC
TGGACCGGCT TTGCGCCGCT CTCGCTGGCC GACAAGGCCG GCATCTTCAA GAAGAACGGC
CTGGACGTCG AACTCAAGAT GATTCCGCAG AAGGACCGGC ACCTCGCGCT GGCCTCCGGC
GCCATCCAGT GCGCCGCCAC CACGGTGGAA ACGCACGTGG CCTGGAACGC CAACGGCGTG
CCCATCGTGC AGATTTTCCA GATGGACAAG TCCTACGGCG CCGACGGCCT CGCGGTGCGC
AACGACGTGA AGGGCTTTGC CGACCTCAAG GGCAAGACCA TCGGCGTGAG CGCGCCGGGC
ACCGCGCCTT ACTTCGGCCT GGCCTGGATG CTCAACAAGA ACGGCATGAC GCTGAAGGAC
GTGAAGCTGG TCTCGCTCGA GCCGCAGCCC GCGGCCCAGG CCTTCGTGGC CGGCCAGAAC
GACGCCGCCA TGACCTACGA GCCGTATCTT TCGACCGTGC GCGCCAACCC CACCGCCGGC
AAGATCCTGG CCACCACGCT CGACTACCCG ATGGTGATGG ACACCGTGGG CTGCGCGCCC
ACCTGGCTCA AGGCCAACGC CAAGGCGGCG CAGGCGCTCG CGCAGTCGTA CTTCGAGGCA
CTCGACATGA TCAAGGCCGA CCCGGCCAAG GCCAACGAGC TCATGGGTTC GGCCGTCAAG
CAGACCGGCG AGCAGTTCGC CAAGTCGTCG GCCTACCTGC GCTGGCAGGA CAAGGCCGCC
AACCAGAAAT TCTTCGCGGG CGAGCTCACC GGCTTCATGA AGGAAGCCGC GCCCATCCTG
CTGGAGGCCG GCGTGATCCG CAAGGCGCCG GAAGACTACA CGGCCATGTT CGATGCAAGC
TTCGTCAAGT AA
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| Protein sequence | MVVKTVVVKV ASLLAAGACA AGMAQTAAAQ ETRIALGMSG WTGFAPLSLA DKAGIFKKNG
LDVELKMIPQ KDRHLALASG AIQCAATTVE THVAWNANGV PIVQIFQMDK SYGADGLAVR
NDVKGFADLK GKTIGVSAPG TAPYFGLAWM LNKNGMTLKD VKLVSLEPQP AAQAFVAGQN
DAAMTYEPYL STVRANPTAG KILATTLDYP MVMDTVGCAP TWLKANAKAA QALAQSYFEA
LDMIKADPAK ANELMGSAVK QTGEQFAKSS AYLRWQDKAA NQKFFAGELT GFMKEAAPIL
LEAGVIRKAP EDYTAMFDAS FVK
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