Gene Vapar_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0146 
Symbol 
ID7971682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp144371 
End bp144919 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID644790749 
Producthypothetical protein 
Protein accessionYP_002942075 
Protein GI239813165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.400198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCT TTGTCCACGT AGACCAACCC ACTGTCCATC CCGGCGTGCA GCGCGCCGAG 
ATCCTGTTCG GCCAGCTCAA GGCCGCACGC GCCGGCGCGA ACGGTTCGCG TCCGCTGATC 
GCCCTGCTGA TCGTCGCCGT TGCCGCGGCG GTGATGGTGG TGGCCGACAA GCTCGTTTCC 
AACTGGGACG AAGGCGCGCT GCTCGCGGCC TGGGCCGTGC TCTGCGCTGC CGCCTTCGGC 
ATTGCCGCGC TGTTCGCCGG CTCGCTGCGC GCTCCCCTGG CCCGCGTGGG TGCCGCCTGG 
AACGCAGCCG CCCAGCGCCG TGCCTCGGCC CGCGCCGACG CCCGTTTCCT GGAAACCGCC 
AGGAACGACC CGCGCGTGAT GCAGGAACTG CAAGCCGCCA CCTGGCGCGA GCAGTCCGAA 
GGCAAGGTTT CCGTCGCCAC TGCCGCCAAG GTGGACGCAC TGACCCGCGT GGCCGCACGC 
TCCAGCGAAG CGCGCATGCC GACGCTCTAC GAAGCCATGC GCCGCATGAA CAGCTCGCGC 
TACTACTGA
 
Protein sequence
MTSFVHVDQP TVHPGVQRAE ILFGQLKAAR AGANGSRPLI ALLIVAVAAA VMVVADKLVS 
NWDEGALLAA WAVLCAAAFG IAALFAGSLR APLARVGAAW NAAAQRRASA RADARFLETA 
RNDPRVMQEL QAATWREQSE GKVSVATAAK VDALTRVAAR SSEARMPTLY EAMRRMNSSR 
YY