Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0146 |
Symbol | |
ID | 7971682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 144371 |
End bp | 144919 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644790749 |
Product | hypothetical protein |
Protein accession | YP_002942075 |
Protein GI | 239813165 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.400198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCT TTGTCCACGT AGACCAACCC ACTGTCCATC CCGGCGTGCA GCGCGCCGAG ATCCTGTTCG GCCAGCTCAA GGCCGCACGC GCCGGCGCGA ACGGTTCGCG TCCGCTGATC GCCCTGCTGA TCGTCGCCGT TGCCGCGGCG GTGATGGTGG TGGCCGACAA GCTCGTTTCC AACTGGGACG AAGGCGCGCT GCTCGCGGCC TGGGCCGTGC TCTGCGCTGC CGCCTTCGGC ATTGCCGCGC TGTTCGCCGG CTCGCTGCGC GCTCCCCTGG CCCGCGTGGG TGCCGCCTGG AACGCAGCCG CCCAGCGCCG TGCCTCGGCC CGCGCCGACG CCCGTTTCCT GGAAACCGCC AGGAACGACC CGCGCGTGAT GCAGGAACTG CAAGCCGCCA CCTGGCGCGA GCAGTCCGAA GGCAAGGTTT CCGTCGCCAC TGCCGCCAAG GTGGACGCAC TGACCCGCGT GGCCGCACGC TCCAGCGAAG CGCGCATGCC GACGCTCTAC GAAGCCATGC GCCGCATGAA CAGCTCGCGC TACTACTGA
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Protein sequence | MTSFVHVDQP TVHPGVQRAE ILFGQLKAAR AGANGSRPLI ALLIVAVAAA VMVVADKLVS NWDEGALLAA WAVLCAAAFG IAALFAGSLR APLARVGAAW NAAAQRRASA RADARFLETA RNDPRVMQEL QAATWREQSE GKVSVATAAK VDALTRVAAR SSEARMPTLY EAMRRMNSSR YY
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