| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0141 |
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| Symbol | |
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| ID | 7971677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 139259 |
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| End bp | 140488 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790744 |
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| Product | nucleoside recognition domain protein |
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| Protein accession | YP_002942070 |
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| Protein GI | 239813160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCAACG GCTTGTGGCT GGGTTTCTTC GGGGTGGCGA TGCTGGCGGC GCTCGGGCGC
TGGCTCGTGG GCGGCGATGC GGCGGTCTTC GCGGCCATCG TCGAAAGCCT GTTCGCGATG
GCGCGGCTCG CGGTCGAGGT GATGGTGCTG CTGTTCGGCA CGCTCACGCT GTGGCTCGGC
TTCCTGCGCA TCGCGGAGGC CGCGGGGCTG GTGGGCTGGC TCGCGCGCCT GCTCGGCCCG
CTCTTCAGGC GGCTCATGCC GGGCGTGCCC GCGGGGCATC CGGCGCTGGG GCTCATCACG
ATGAACTTCG CGGCCAATGC GCTCGGCCTG GACAACGCGG CCACGCCCAT CGGCCTCAAG
GCCATGCGCG AGCTGCAGCG GCTCAACCCC GACCCGGTCA CGGCCACCAA CGCGCAGATC
CTGTTCCTGG TGCTCAACGC GTCTTCGCTC ACGCTGCTGC CCGTGACGAT CTTCATGTAC
CGCGCGCAGC AGGGCGCGAG CGATCCGACG ATGGTGTTCC TGCCGATCCT GCTGGCCACC
AGCGCATCGA CGCTGGTGGG CCTGCTCGCC GTGGCCGTGG CGCAGCGCCT GCGGCTGTGG
GACCCGGTGG TGCTGGCCTA CCTGGTGCCG GCCGCGCTGC TGCTGGGCGG CTTCATGGCG
CTCTTGGGCA CGCTCTCGGC GGCGGCGATT GCGTCGCTCT CCTCGCTCAT GGGCAACCTT
GTGCTGTTCG GCGTGATCAT CGTGTTCCTG CTGGCCGGCG CGGTCCGCCG CATCAAGGTG
TACGAATGTT TTATCGAGGG CGCGAAGGAA GGCTTCGACA TCGCGAAGAA CCTGCTGCCC
TACCTGGTGG CAATGCTGTG CGCGGTCGGC GTGCTGCGCG CCTCGGGTGC GCTGGACTTC
GTGCTCGGCG GCCTGCGCTG GCTGGTGAGC GCGGGCGGCT GGGATGCGCG CTTTGTCGAC
GCCATGCCCA CCGCGCTGGT CAAGCCCTTC TCGGGCAGCG CGGCGCGCGC GATGCTGATC
GAGACCATGA AGAGCCAGGG CGTGGACAGC TTCCCCGCGC TGGTGGCAGC CACCATCCAG
GGCAGCACCG AAACCACCTT CTACGTGCTG GCGGTGTACT TCGGCGCGGT CGGCATCCAG
CGCGCGCGGC ATGCGGTTTC TTGCGCGCTC GCGGCCGAGC TGGCGGGCGT GGTGGCGGCG
ATTGCGGTGT GCTACTGGTT CTTCGGCTGA
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| Protein sequence | MLNGLWLGFF GVAMLAALGR WLVGGDAAVF AAIVESLFAM ARLAVEVMVL LFGTLTLWLG
FLRIAEAAGL VGWLARLLGP LFRRLMPGVP AGHPALGLIT MNFAANALGL DNAATPIGLK
AMRELQRLNP DPVTATNAQI LFLVLNASSL TLLPVTIFMY RAQQGASDPT MVFLPILLAT
SASTLVGLLA VAVAQRLRLW DPVVLAYLVP AALLLGGFMA LLGTLSAAAI ASLSSLMGNL
VLFGVIIVFL LAGAVRRIKV YECFIEGAKE GFDIAKNLLP YLVAMLCAVG VLRASGALDF
VLGGLRWLVS AGGWDARFVD AMPTALVKPF SGSAARAMLI ETMKSQGVDS FPALVAATIQ
GSTETTFYVL AVYFGAVGIQ RARHAVSCAL AAELAGVVAA IAVCYWFFG
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