| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0139 |
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| Symbol | |
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| ID | 7971675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 138143 |
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| End bp | 138625 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790742 |
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| Product | transport-associated |
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| Protein accession | YP_002942068 |
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| Protein GI | 239813158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.852261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCATGT CGCTGCTGCT GGTTGCGCAG AACGTGGCGG CGCAGGAGCC GGCCGCACCG
CTCAAGCAGA ACTGGTTCGA CGATCCCTTC TTCCAGGTTT CCGCCGGCCT GCCCGCCTGC
GCCATGCCCG AAGGCCCGTT CTACACCGCC GAGGAGCGCC GCGCCCAGAC TCATTCGCGG
CTGGAGCGCG GCACCAGCTG CTGGCTTGCC GGCCAATGCA CCGACAGCAA CGCCTACCGC
TACGACAAGC CGCTCGCGCC CAAGGTGCGC GCCGCGCTCT CGGCCGTGCC GGGCGTGCAG
AAGGCGAGCG TGTGGGTGAT GATCCAGCGG CGCTGGGTCT ACCTGCAAGG CTGCGTGCCC
TCGGCCGCGG TGGCCAGGAA GCTCGAACGC GCCGCGCGCG CGGTGCCCGA TGTCGAGACC
GTGGTGACCG ACCTGATGGT CGGCACGCGG GGCAAGCCGC CGTATCCCGT GGCCGGCCGG
TGA
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| Protein sequence | MCMSLLLVAQ NVAAQEPAAP LKQNWFDDPF FQVSAGLPAC AMPEGPFYTA EERRAQTHSR
LERGTSCWLA GQCTDSNAYR YDKPLAPKVR AALSAVPGVQ KASVWVMIQR RWVYLQGCVP
SAAVARKLER AARAVPDVET VVTDLMVGTR GKPPYPVAGR
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