| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0123 |
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| Symbol | |
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| ID | 7971659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 122853 |
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| End bp | 123431 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790726 |
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| Product | Uracil-DNA glycosylase superfamily |
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| Protein accession | YP_002942052 |
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| Protein GI | 239813142 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.874568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCGC TGCTCGCGGA AATCCGCGGC TGCACCGCCT GCGCCGCGCA GCTGCCGCTG
GGCCCGCGGC CCGTGGTGCA GGCCAGCGCC AGCGCGCGCC TCTTGATCGT CGGCCAGGCG
CCGAGCCTGA CGGTGCACGC CACCGGCCTG CCATGGGACG ACAAGAGCGG CGAGCAGCTG
CGCCGCTGGC TCGGCATCGA GCGCGAGGTT TTCTACGACG CTGCGCGCAT CGCGATCATG
CCGATGGGCT ACTGCTACCC CGGCCGCGGC AGCAGCGGCG ACCTGCCGCC GCGCCGCGAG
TGTGCCGAGC TCTGGCATGC GCGCCTGCTC GCGCAGATGA GCCGGGTCGA GCTCACGCTG
CTGATCGGCC AGTACGCGCA GCGCCATTTT TTGGGCGCGG CGCGCAAGGC CGGCGTCACC
GAGACCGTCG CGGCCTTTGC GGAATTTGCG CCGCGCTTCA TTCCGCTGCC GCATCCGTCG
CCGCGCAACA CCGGCTGGTT CAAGCACCAT CCGTGGTTCG AGAGCGAGGT GCTGCCGGTG
CTGCGCGAAC GCGTGCGGCA GGCGCTCGCG CAGCCCTAG
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| Protein sequence | MDALLAEIRG CTACAAQLPL GPRPVVQASA SARLLIVGQA PSLTVHATGL PWDDKSGEQL
RRWLGIEREV FYDAARIAIM PMGYCYPGRG SSGDLPPRRE CAELWHARLL AQMSRVELTL
LIGQYAQRHF LGAARKAGVT ETVAAFAEFA PRFIPLPHPS PRNTGWFKHH PWFESEVLPV
LRERVRQALA QP
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