| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0122 |
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| Symbol | |
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| ID | 7971658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 122006 |
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| End bp | 122836 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790725 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942051 |
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| Protein GI | 239813141 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.647866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCA CCGTCGCCCA GAAACGCGCC GAGTTCCGCG CGCTGCACGA ACAGGGCTGC
TTCGCCATTC CGAACCCCTG GGACAAGGGC AGCGCGCGCT ACCTGCAGGG CCTGGGTTTC
AAGGCGCTGG CCACCACGAG CTCGGGCCAT GCCTGGTCGC AGGGCCTGGC CGACGGAGGG
CAGTCGCGCG ACACCATGCT GGCCCACCTG CGCGACATCG TCGGTGCCAC CGACCTGCCC
GTGAATGCGG ACTTCGAGAA CGGCTTCGCG GCCGATGTAG AGGGCGTGGC CGAAAGCGTG
CGCCTCGCGG TCGAGACCGG CGTGGCAGGC CTGTCGATCG AGGATTCGAC CGGCGATGCG
GCCAATCCAC TGTTCGAGAT CGGCGTGGCG GTCGAACGGC TGCGCGCGGC GCGCCGCGCC
ATCGACGCGG CCGGCGGCGA CACGCTGCTG GTGGGCCGCG CCGAGAACTT CTTTGTCGGC
CGCCCCGACC TGGACGACGC CATCGCCCGC CTCAAGGCCT ACGCCGAGGC CGGCGCCGAC
TGCCTCTACG CGCCGGGCAT CCGCACGCGC GAGCAGATCG CGGCGGTGGT GGCCGCGGTG
GCGCCCAAGC CGGTCAACCT GCTGATCGGC TGGGCCAGCG AGCTCGGCAT GCAGGACATT
GCCGCGCTCG GCGTGCGGCG CGTCAGCGTG GGCGGCGCGC TCGCCCGCGC GGCCTGGGGC
GGCTTCGACC GCGCCGCCCG GGCGCTGGCC GAGAAGGGAC GTTTCGATGG CTTCGAAGGC
GCGGCCTCCG GGGCCGATCT CGATGGCTTC TTCGGCCGGT TCTCCGAATA G
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| Protein sequence | MTRTVAQKRA EFRALHEQGC FAIPNPWDKG SARYLQGLGF KALATTSSGH AWSQGLADGG
QSRDTMLAHL RDIVGATDLP VNADFENGFA ADVEGVAESV RLAVETGVAG LSIEDSTGDA
ANPLFEIGVA VERLRAARRA IDAAGGDTLL VGRAENFFVG RPDLDDAIAR LKAYAEAGAD
CLYAPGIRTR EQIAAVVAAV APKPVNLLIG WASELGMQDI AALGVRRVSV GGALARAAWG
GFDRAARALA EKGRFDGFEG AASGADLDGF FGRFSE
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