| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0109 |
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| Symbol | |
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| ID | 7971645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 109790 |
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| End bp | 110503 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790712 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942038 |
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| Protein GI | 239813128 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3826] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0103395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCT CTCCTGCCCA CATCGTCCGC GCCCTCGACT GGCCCCGCAT CGAAACCGAG
CTTGCCACGC GCGGCTGCGC AACCACGGGC GTGCTGTTCA GCCCGAAGGA GTGCGCCGCG
CTGGCCGCGC TGTATGACGA GCCCGGCCAT TTCCGCAGCC GCGTGGTGAT GCAGCGCCAC
GGCTTCGGCC AGGGCGAGTA CCAGTACTTC GGCAACCCGC TGCCGGCTCC GGTCGCGGCC
TGGCGCAGCG CGCTGTACGA GCGCCTCGCG CCGCTCGCGA ACGCATGGGC CGCCGCGATG
GGCCAGCCGG CCGACTACCC GGCGGACCAC GCGGCCTATC TCGCGCGCTG CCATGCGGCG
GGCCAGCTGC GGCCCACGCC GCTGCTGCTG CGCTATGTCG AAGGCGACTA CAACTGCCTG
CACCAGGACC TGTACGGCGA CCTGCAGTTC CCGATGCAGC TCACGGTGCT GCTGAGCCGG
CCGGGCGAAG ACTTCACGGG CGGCGAATTC GTGCTCACCG AGCAGCGCCC GCGCATGCAG
TCGCGCGCCG AGGTGGTGGC GCTCGCGCAG GGCGAGGCGG TGGTCTTCGC GGTCAACCAG
CGGCCCGTGG CGGGCACGCG CGGCAGCTAC CGCGTCACCA TGCGGCACGG CGTGAGCCGC
GTGCGCGCGG GGCGGCGGCA CACGCTGGGA ATCATCTTCC ACGACGCGCG CTAG
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| Protein sequence | MPTSPAHIVR ALDWPRIETE LATRGCATTG VLFSPKECAA LAALYDEPGH FRSRVVMQRH
GFGQGEYQYF GNPLPAPVAA WRSALYERLA PLANAWAAAM GQPADYPADH AAYLARCHAA
GQLRPTPLLL RYVEGDYNCL HQDLYGDLQF PMQLTVLLSR PGEDFTGGEF VLTEQRPRMQ
SRAEVVALAQ GEAVVFAVNQ RPVAGTRGSY RVTMRHGVSR VRAGRRHTLG IIFHDAR
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