| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0108 |
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| Symbol | |
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| ID | 7971644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 107654 |
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| End bp | 109600 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790711 |
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| Product | adenylate/guanylate cyclase with integral membrane sensor |
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| Protein accession | YP_002942037 |
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| Protein GI | 239813127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0450692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA AGAACTCATC CGGGTCTGCG GGTGGGGCGG GAAAGCCGCC TCTCGCATTC
TTTGAATTTT CCGCCGCCGT GGCGCGGCTT TCGCGCCGCT TCAGGGTCGA CGTGAGCACC
ATCGTGAGCG CGGTGGCGCT GACGCAGTCG CTGCTGCTGG CCACGCTCGG CTACTGGGGC
TCGCAGCGGC TGGTGGCGAA GATCGGCGCC TCCGCGCACG CGGCCAACCA CTACCGCACC
GAGGACAACA TGCTCGCGGT CCTCGCCAAG ACCGAGTCGG CGGTCGGTGC GCTGGCCGGC
GCGCCCAGCC TCGGCGCCGC GGGCGAGCAT GCCCAGCGCA CGGCCGAGCT TCTGTGGACC
CTGCTGCAGC AGGCGCCCGA GCTCGACAGC CTCTACGTGG CCGACGACAC GGGCCAGATG
CTGATGGCGC TGCGCTACCC GGTGCCGGCC ATCCGGCGCA TCGCGCGCGG CGCGGGCACC
GGCGAACTCG CCATCGAGAC CTGGCAGTAC AAGCTGCCGC CCGCGCCCGA GATCGACGCG
CAGCAGCGCT TCGCCACGCA GCGCATCGAG TCCTTCCGCA GCGGCTACGA CCCGCGGCTG
CAGCGCTGGT ACCAGCAGGC GCGCCAGATG CAAAGGCCCG TGTGGACCGC GCCCTACGCC
TTCGCCGCGA CGCAGGAGCT GGGCGTGAGC TATGCCTTGC CCAGCAAGCG CCGCGCGGCC
GAAGGCGGCC CCCGGCTGCT GGTGGTGGGC GGCGATGTCT CGCTGGGCCG GCTCTCGCAG
TTCGTGCGGC TGTTCGCAAG CGACGGCCGC GGCGACGGCG CCCTGCTGGA CGCCGGCGAC
CAGGTGCTCG CGCGCAGCGA CCAGCCCGGC GTGCTGCGCC AGCCCGAGCC GCCCACCGGC
GTGCTGGGCG CGCTGCACGC CCAGATGCTG GAGAACCGCA CGCCGGACGG CGCGGGCGGC
GCGGCCTTCT CGTTCGAGCA CGAAGGGCGC GGCTACCTGG CCCAGGCTTC GCGCATTCCT
TCGGCCGGCT GGCAGCTGGT GAGCTGGGTG CCCGAGGACT TCGTGCTCGG CGCCCTGCGG
CGCGCCGTGC TGTGGTGGCT GCTGCTGGGC CTGGCGCTGC TCGCGGCCGC GCTGTTCGTG
TCGCTGCAGC TGTCCAGGCT GGTCACCTCG CCGGTCGAGA AGCTCGCGCA AATCGCGCGC
CGCATCGGCC TGCTGGAGCT CGACGACCTG CCGCGCGAGC CGAGCCGCGT GCTCGAGATC
CAGAACCTGG ACCGGGCGCT GGACGAATCG GCGCGCAGCC TCAGGGCGTT CAGCAAGTTC
GTGCCGGTGG ACGTGATCAG CCAGCTCGTG GCCGAGGGCC AGGCGCTGGC GCCCAGCGGG
TCGCCGCGGC GCATGACCGT GATGTTCACC GACATCGAGG GCTTCACGCG GATCTCCGAA
TCGATGGAAG CCAATGTGCT GGTGCGCATG CTGACCGAAT ACTTCAACCT GGCCACCCGC
GTGCTGGCGC GCTACGGCGG CGTGGTCGAC AAGTTCATGG GCGACGGCAT CATGGTGCTG
TGGGGCGCGC CCGCCGACCT GAAGGACGCG GAGTACCGCG CCTGCCTGGC CGCGCTGCAG
CTGCACATCG AGACGAGTGC GCTCAACCGC AGGTGGCGCG CCGACGGGCT GCCCGAGTTC
CGCACGCGCG TGGGGATCCA CACCGGCGTG GCGATCGCGG GCGTGCTGGG CTCCAACGAC
CGGCTGTCCT ACACGGCGCT GGGCGACGTG GTCAACGTGG CCAGCCGCAT CGAGGGCATC
AACAAGCAGC TGGGCACGCA CACGCTGATC TCGGAGGTCA CCTGCGCGGG CCTGAAGGGC
CGGCTGCAGA CGCGCCGCAT CGACGAGCGG GTGGCGCTGC GCGGCCGCCA GACGCGCATG
GTGCTCTACG AACTGCTGAT GCCCTGA
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| Protein sequence | MNKKNSSGSA GGAGKPPLAF FEFSAAVARL SRRFRVDVST IVSAVALTQS LLLATLGYWG
SQRLVAKIGA SAHAANHYRT EDNMLAVLAK TESAVGALAG APSLGAAGEH AQRTAELLWT
LLQQAPELDS LYVADDTGQM LMALRYPVPA IRRIARGAGT GELAIETWQY KLPPAPEIDA
QQRFATQRIE SFRSGYDPRL QRWYQQARQM QRPVWTAPYA FAATQELGVS YALPSKRRAA
EGGPRLLVVG GDVSLGRLSQ FVRLFASDGR GDGALLDAGD QVLARSDQPG VLRQPEPPTG
VLGALHAQML ENRTPDGAGG AAFSFEHEGR GYLAQASRIP SAGWQLVSWV PEDFVLGALR
RAVLWWLLLG LALLAAALFV SLQLSRLVTS PVEKLAQIAR RIGLLELDDL PREPSRVLEI
QNLDRALDES ARSLRAFSKF VPVDVISQLV AEGQALAPSG SPRRMTVMFT DIEGFTRISE
SMEANVLVRM LTEYFNLATR VLARYGGVVD KFMGDGIMVL WGAPADLKDA EYRACLAALQ
LHIETSALNR RWRADGLPEF RTRVGIHTGV AIAGVLGSND RLSYTALGDV VNVASRIEGI
NKQLGTHTLI SEVTCAGLKG RLQTRRIDER VALRGRQTRM VLYELLMP
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