| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0104 |
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| Symbol | |
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| ID | 7971640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 103112 |
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| End bp | 103894 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790707 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942033 |
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| Protein GI | 239813123 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.464024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACGG CCGCCGACTT CCTTCGCTTC GACGGCGTCG CGATCCGGCT CGGCGGACGC
GAGATCCTGT CGCCCACCTC GTTCGACGTG GCGCGCGGCG AGTTCGTCTG CATCGTGGGC
CCGAGCGGCT GCGGCAAGAC CACGCTGCTG CGCGCGGCCA GCGGCCTGGT CGCCGCGAGC
GCCGGCGAGG TGCGGCGCAA GGGCGTGAAG ATGAGCGAGC CGTCGCGCGA AGTGGCCTTC
GTGTTCCAGG ACTACGGCCG CGCGCTGCTG CCCTGGCGCA CGGTCGAAGG CAACGTGAGC
CTCGCGCTCG AAGCGGCTGG CGTGCCCGCG GCCGAGCGCG CGCCGCGCAT TGCCGAGGTG
CTCGGCAAGG TCGGTCTCGC GAAGCATGCG CAGAAGTTTC CGGTGCAGCT TTCGGGCGGC
ATGCAGCAGC GCGCGCAGAT TGCCCGCTGC CTGGCGCAGA AGCCCGAACT CATGATGATG
GACGAGCCCT TCGGCGCGCT CGATGCGCTC ACGCGCCAGA GCCTGCAGGA CGAGCTCGCG
CGGCTGGTGC GCGACGACGG GCTCACGGTG CTGTTCGTCA CGCACGATCT CGAGGAGGCC
ATCTACCTGG GCGACCGCGT GATCGCGCTG CAGGCCAACC CCGGGCCGGG GCGGCCCAGC
CTGGCGCGGA TGATCGACGT GAAGATTCCG CGGCCGCGCG ACCAGCTCAC GACCAAGGAG
CATCCGGAAT ACCTGCAGCT GCGCCGTGAA CTGTTTGCCT TCATCGAGCA AGGCCATGAC
TGA
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| Protein sequence | MSTAADFLRF DGVAIRLGGR EILSPTSFDV ARGEFVCIVG PSGCGKTTLL RAASGLVAAS
AGEVRRKGVK MSEPSREVAF VFQDYGRALL PWRTVEGNVS LALEAAGVPA AERAPRIAEV
LGKVGLAKHA QKFPVQLSGG MQQRAQIARC LAQKPELMMM DEPFGALDAL TRQSLQDELA
RLVRDDGLTV LFVTHDLEEA IYLGDRVIAL QANPGPGRPS LARMIDVKIP RPRDQLTTKE
HPEYLQLRRE LFAFIEQGHD
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